RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	CLEC1B	Q9P126	229 aa		10.24	□□□□□ -0.77
SIN3A-205	ENST00000564778	DNMT3L	Q9UJW3	386 aa		10.24	□□□□□ -0.77
SIN3A-205	ENST00000564778	SNX12	Q9UMY4	172 aa		10.24	□□□□□ -0.77
SIN3A-205	ENST00000564778	PACSIN2	Q9UNF0	486 aa	Predicted RBP	10.24	□□□□□ -0.77
SIN3A-205	ENST00000564778	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	10.24	□□□□□ -0.77
SIN3A-205	ENST00000564778	HELZ	P42694	1942 aa	Known RBP	10.24	□□□□□ -0.77
SIN3A-205	ENST00000564778	DENND4A	Q7Z401	1863 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	XIRP2	A4UGR9	3374 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	C2orf78	A6NCI8	922 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	SPDYE4	A6NLX3	237 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	KCNU1	A8MYU2	1149 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	ZNF197	O14709	1029 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	MSI1	O43347	362 aa	Known RBP	10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	TBX18	O95935	607 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	RARA	P10276	462 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	SLC2A3	P11169	496 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	MYL4	P12829	197 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	TCP1	P17987	556 aa	Known RBP	10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	CASQ1	P31415	396 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	CCR1	P32246	355 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	RWDD2B	P57060	319 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	CYP4F8	P98187	520 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	ITIH3	Q06033	890 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	NME3	Q13232	169 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	MTA1	Q13330	715 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	DPYSL2	Q16555	572 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	AAK1	Q2M2I8	961 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	DCAF12L1	Q5VU92	463 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	NUGGC	Q68CJ6	796 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	TXNDC8	Q6A555	127 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	TXNRD3NB	Q6F5E7	133 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	TMC5	Q6UXY8	1006 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	SND1	Q7KZF4	910 aa	Known RBP eCLIP	10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	GRASP	Q7Z6J2	395 aa	Predicted RBP	10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	FAM131B	Q86XD5	332 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	CCDC185	Q8N715	623 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	C12orf76	Q8N812	135 aa	Predicted RBP	10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	EXD1	Q8NHP7	514 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	KIF18A	Q8NI77	898 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	ATXN2L	Q8WWM7	1075 aa	Known RBP	10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	PLD4	Q96BZ4	506 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	PABPC5	Q96DU9	382 aa	Known RBP	10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	TCEAL4	Q96EI5	215 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	ZFR	Q96KR1	1074 aa	Known RBP	10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	SNRNP25	Q9BV90	132 aa	Known RBP	10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	ADAM7	Q9H2U9	754 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	ATXN3L	Q9H3M9	355 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	TASP1	Q9H6P5	420 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	DDX56	Q9NY93	547 aa	Known RBP	10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	10.23	□□□□□ -0.77	1e-6	■■■□□ 14.7
SIN3A-205	ENST00000564778	SFMBT1	Q9UHJ3	866 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	RASAL2	Q9UJF2	1139 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	NUDT5	Q9UKK9	219 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	FZD10	Q9ULW2	581 aa		10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	NUP210	Q8TEM1	1887 aa	Predicted RBP	10.23	□□□□□ -0.77
SIN3A-205	ENST00000564778	SYNJ2BP-COX16	A0A087WUM0	186 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	TRAV19	A0A0A6YYK7	116 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	ZNF487	B1APH4	448 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778		I6L893	689 aa	Predicted RBP	10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	WEE1	P30291	646 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	PTPN7	P35236	360 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	ADRA1B	P35368	520 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	LTBR	P36941	435 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	ARSE	P51690	589 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	ZNF135	P52742	658 aa	Predicted RBP	10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	TBX4	P57082	545 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	NTHL1	P78549	312 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	COG7	P83436	770 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	SEMA3B	Q13214	749 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	TEAD2	Q15562	447 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	PPP2R5E	Q16537	467 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	TAZ	Q16635	292 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	SMTNL2	Q2TAL5	461 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	ARL13B	Q3SXY8	428 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	ARHGAP15	Q53QZ3	475 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	RARS2	Q5T160	578 aa	Known RBP	10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	ERMARD	Q5T6L9	678 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	ACBD5	Q5T8D3	534 aa	Predicted RBP	10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	RBM41	Q96IZ5	413 aa	Known RBP	10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	PBK	Q96KB5	322 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	MSLNL	Q96KJ4	702 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	SLC22A12	Q96S37	553 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	OSBPL9	Q96SU4	736 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	KLF16	Q9BXK1	252 aa	Predicted RBP	10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	NACA2	Q9H009	215 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	RNF38	Q9H0F5	515 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	S1PR5	Q9H228	398 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	WDCP	Q9H6R7	721 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	ZWILCH	Q9H900	591 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	PIDD1	Q9HB75	910 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	ANLN	Q9NQW6	1124 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	10.22	□□□□□ -0.77	3e-7	■■■■■ 27.8
SIN3A-205	ENST00000564778	COX16	Q9P0S2	106 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	RCOR3	Q9P2K3	495 aa	Predicted RBP	10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	PCSK1N	Q9UHG2	260 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	ARHGAP26	Q9UNA1	814 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	AP4E1	Q9UPM8	1137 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	SAR1B	Q9Y6B6	198 aa		10.22	□□□□□ -0.77
SIN3A-205	ENST00000564778	DOCK8	Q8NF50	2099 aa		10.22	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms