RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 CFAP36Q96G28 342 aa7.89□□□□□ -1.15
ATXN3-249ENST00000564606 ZFRQ96KR1 1074 aaKnown RBP7.89□□□□□ -1.15
ATXN3-249ENST00000564606 QKIQ96PU8 341 aaKnown RBP eCLIP7.89□□□□□ -1.15
ATXN3-249ENST00000564606 FAM111AQ96PZ2 611 aa7.89□□□□□ -1.15
ATXN3-249ENST00000564606 CPXM1Q96SM3 734 aa7.89□□□□□ -1.15
ATXN3-249ENST00000564606 SLC9A7Q96T83 725 aa7.89□□□□□ -1.15
ATXN3-249ENST00000564606 MMP19Q99542 508 aa7.89□□□□□ -1.15
ATXN3-249ENST00000564606 OSBPL1AQ9BXW6 950 aa7.89□□□□□ -1.15
ATXN3-249ENST00000564606 HAPLN2Q9GZV7 340 aa7.89□□□□□ -1.15
ATXN3-249ENST00000564606 MTFR1LQ9H019 292 aa7.89□□□□□ -1.15
ATXN3-249ENST00000564606 GBA2Q9HCG7 927 aaPredicted RBP7.89□□□□□ -1.15
ATXN3-249ENST00000564606 SIRPGQ9P1W8 387 aa7.89□□□□□ -1.15
ATXN3-249ENST00000564606 GGT7Q9UJ14 662 aa7.89□□□□□ -1.15
ATXN3-249ENST00000564606 DCTN4Q9UJW0 460 aa7.89□□□□□ -1.15
ATXN3-249ENST00000564606 TSPAN16Q9UKR8 245 aa7.89□□□□□ -1.15
ATXN3-249ENST00000564606 UBQLN1Q9UMX0 589 aaKnown RBP7.89□□□□□ -1.15
ATXN3-249ENST00000564606 SOX13Q9UN79 622 aa7.89□□□□□ -1.15
ATXN3-249ENST00000564606 AKT3Q9Y243 479 aa7.89□□□□□ -1.15
ATXN3-249ENST00000564606 L3MBTL1Q9Y468 752 aa7.89□□□□□ -1.15
ATXN3-249ENST00000564606 MAD1L1Q9Y6D9 718 aa7.89□□□□□ -1.15
ATXN3-249ENST00000564606 A0A0A0MRY4 1105 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 ARHGEF37A1IGU5 675 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 DYTNA2CJ06 578 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 WDR91A4D1P6 747 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 FAM159BA6NKW6 160 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 TMEM114B3SHH9 223 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 FCHO1O14526 889 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 TIMM44O43615 452 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 STRNO43815 780 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 PEX11AO75192 247 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 NEBLO76041 1014 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 TM7SF2O76062 418 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 PSMG1O95456 288 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 STAMBPO95630 424 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 BPGMP07738 259 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 DLDP09622 509 aaKnown RBP7.88□□□□□ -1.15
ATXN3-249ENST00000564606 CXCL8P10145 99 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 RARBP10826 455 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 ETS1P14921 441 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 AOC1P19801 751 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 KCNA3P22001 575 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 EPHB2P29323 1055 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 SERPINB6P35237 376 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 PTDSS1P48651 473 aaKnown RBP7.88□□□□□ -1.15
ATXN3-249ENST00000564606 IGBP1P78318 339 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 PPARDQ03181 441 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 ZNF33AQ06730 810 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 FAAP100Q0VG06 881 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 IFRD2Q12894 506 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-249ENST00000564606 DYNC1I2Q13409 638 aaKnown RBP7.88□□□□□ -1.15
ATXN3-249ENST00000564606 FASTKD3Q14CZ7 662 aaKnown RBP7.88□□□□□ -1.15
ATXN3-249ENST00000564606 UGP2Q16851 508 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 TUSC1Q2TAM9 212 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 KCNT1Q5JUK3 1230 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 JADE1Q6IE81 842 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 LRRC8BQ6P9F7 803 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 GADL1Q6ZQY3 521 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 SDCCAG8Q86SQ7 713 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-249ENST00000564606 LINC00523Q86TU6 105 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 ZC3H18Q86VM9 953 aaKnown RBP7.88□□□□□ -1.15
ATXN3-249ENST00000564606 TMEM126BQ8IUX1 230 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 HOMEZQ8IX15 550 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 ANKRD13AQ8IZ07 590 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 NDUFAF2Q8N183 169 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 CEP120Q8N960 986 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 STKLD1Q8NE28 680 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 JOSD2Q8TAC2 188 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 RDH11Q8TC12 318 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 FAM172AQ8WUF8 416 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 EMID1Q96A84 441 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-249ENST00000564606 SPDL1Q96EA4 605 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 PTCD3Q96EY7 689 aaKnown RBP7.88□□□□□ -1.15
ATXN3-249ENST00000564606 PWWP2AQ96N64 755 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 SPATA13Q96N96 652 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 KCNK16Q96T55 309 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 PCYT2Q99447 389 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 CPNE1Q99829 537 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 FAM118BQ9BPY3 351 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 CENPKQ9BS16 269 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 SNX25Q9H3E2 840 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 SUDS3Q9H7L9 328 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-249ENST00000564606 NRDE2Q9H7Z3 1164 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 LRRC40Q9H9A6 602 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 PCDH18Q9HCL0 1135 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 VCX3AQ9NNX9 186 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 SLCO1B3Q9NPD5 702 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 NGRNQ9NPE2 291 aaKnown RBP7.88□□□□□ -1.15
ATXN3-249ENST00000564606 DNAJC28Q9NX36 388 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.88□□□□□ -1.15
ATXN3-249ENST00000564606 BFARQ9NZS9 450 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 PPARGC1AQ9UBK2 798 aaKnown RBP7.88□□□□□ -1.15
ATXN3-249ENST00000564606 GTF2IRD1Q9UHL9 959 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 TRHDEQ9UKU6 1024 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 ANKRD6Q9Y2G4 727 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 HEY1Q9Y5J3 304 aa7.88□□□□□ -1.15
ATXN3-249ENST00000564606 A0A0G2JLL6 359 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-249ENST00000564606 B2RBV5 119 aa7.87□□□□□ -1.15
ATXN3-249ENST00000564606 TK2O00142 265 aa7.87□□□□□ -1.15
ATXN3-249ENST00000564606 AHCYL1O43865 530 aa7.87□□□□□ -1.15
ATXN3-249ENST00000564606 SMNDC1O75940 238 aaKnown RBP eCLIP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms