RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	UGT2B11	O75310	529 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	SFN	P31947	248 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	RPL14	P50914	215 aa	Known RBP	4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	PKN2	Q16513	984 aa	Known RBP	4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	ERAP2	Q6P179	960 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	ANO3	Q9BYT9	981 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	TCF7L2	Q9NQB0	619 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	PCDHGC3	Q9UN70	934 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	CYP1A2	P05177	515 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	TRABD2A	Q86V40	505 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	NOL11	Q9H8H0	719 aa	Known RBP	4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	RGS5	O15539	181 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	RGS20	O76081	388 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	RBP1	P09455	135 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	F8A1	P23610	371 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	CAPG	P40121	348 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	PPP5C	P53041	499 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	CYP1B1	Q16678	543 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	DNAJC24	Q6P3W2	148 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	PYDC1	Q8WXC3	89 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288		H3BMM5	538 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	SNAP23	O00161	211 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	COX4I1	P13073	169 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	ENO3	P13929	434 aa	Predicted RBP	4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	RPL21	P46778	160 aa	Known RBP	4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	THAP5	Q7Z6K1	395 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	PROX1	Q92786	737 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	ZUFSP	Q96AP4	578 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	FAM25E	A8MYX2	175 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	KIF28P	B7ZC32	967 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	SLC9A1	P19634	815 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	SLC5A3	P53794	718 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	KIF18B	Q86Y91	864 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	RASAL3	Q86YV0	1011 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	CYP4F11	Q9HBI6	524 aa		4.37	□□□□□ -1.71
MACF1-231	ENST00000564288	SETD1A	O15047	1707 aa	Known RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	MST1R	Q04912	1400 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288		H7C2Y5	167 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	RFPL2	O75678	378 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	BFSP2	Q13515	415 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	PHC3	Q8NDX5	983 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	OXER1	Q8TDS5	423 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	SLC25A23	Q9BV35	468 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	YIPF2	Q9BWQ6	316 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	HDAC3	O15379	428 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	SOAT2	O75908	522 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	POLB	P06746	335 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	RBM48	Q5RL73	367 aa	Known RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	IL23R	Q5VWK5	629 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	CNST	Q6PJW8	725 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	RFX6	Q8HWS3	928 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	C18orf8	Q96DM3	657 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	CPXM1	Q96SM3	734 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	CCNB1IP1	Q9NPC3	277 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	PPL	O60437	1756 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	CCNT2	O60583	730 aa	Known RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	QARS	P47897	775 aa	Known RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	ACAP2	Q15057	778 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	CRELD1	Q96HD1	420 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	ANKMY1	Q9P2S6	941 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	CDH9	Q9ULB4	789 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288		A0A0J9YVX5	310 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	SEC24A	O95486	1093 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	TRIM32	Q13049	653 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	ZSWIM3	Q96MP5	696 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	TBCB	Q99426	244 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	NEUROG2	Q9H2A3	272 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	GSTK1	Q9Y2Q3	226 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	NCKAP5L	Q9HCH0	1330 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	MRPS14	O60783	128 aa	Known RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	MAPK12	P53778	367 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	SLC18A2	Q05940	514 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	PPP2R2D	Q66LE6	453 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	FRMD7	Q6ZUT3	714 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	GOLPH3	Q9H4A6	298 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	CCDC177	Q9NQR7	707 aa	Predicted RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	NINJ2	Q9NZG7	142 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	ZW10	O43264	779 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	ATMIN	O43313	823 aa	Predicted RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	ITGAX	P20702	1163 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	OSBP	P22059	807 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	ACTR2	P61160	394 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	SEL1L3	Q68CR1	1132 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	SH2D3A	Q9BRG2	576 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	INTS2	Q9H0H0	1204 aa	Known RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	RUVBL2	Q9Y230	463 aa	Known RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	HEATR9	A2RTY3	570 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	ZBTB39	O15060	712 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	MSH3	P20585	1137 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	ZNF181	Q2M3W8	571 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	DNAAF3	Q8N9W5	541 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	STARD8	Q92502	1023 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	4.36	□□□□□ -1.71	2e-6	■■■■■ 48
MACF1-231	ENST00000564288		Q96MT0	163 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	C6orf222	P0C671	652 aa	Predicted RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	NUDT1	P36639	197 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	DMC1	Q14565	340 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	MCPH1	Q8NEM0	835 aa		4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	AVEN	Q9NQS1	362 aa	Predicted RBP	4.36	□□□□□ -1.71
MACF1-231	ENST00000564288	ACE	P12821	1306 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms