RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 LRRC4BQ9NT99 713 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 C15orf41Q9Y2V0 281 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 UBXN8O00124 270 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 TRIM13O60858 407 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 PCNAP12004 261 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 HALP42357 657 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 RSBN1Q5VWQ0 802 aaPredicted RBP12.97□□□□□ -0.33
SYNM-203ENST00000560674 CARNMT1Q8N4J0 409 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.97□□□□□ -0.33
SYNM-203ENST00000560674 MAGED4Q96JG8 741 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 ACOX2Q99424 681 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 NUDT12Q9BQG2 462 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 MMADHCQ9H3L0 296 aaPredicted RBP12.97□□□□□ -0.33
SYNM-203ENST00000560674 UBP1Q9NZI7 540 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 DAPK2Q9UIK4 370 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 SLC25A13Q9UJS0 675 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 KLHL20Q9Y2M5 609 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 PCDHA3Q9Y5H8 950 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 USP32Q8NFA0 1604 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 TK2O00142 265 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 MT-CO1P00395 513 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 SLC2A4P14672 509 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 RPS12P25398 132 aaKnown RBP12.97□□□□□ -0.33
SYNM-203ENST00000560674 RFX3P48380 749 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 LHX1P48742 406 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 CDH17Q12864 832 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 SVOPQ8N4V2 548 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 GMCL1P1Q8NEA9 526 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 FIG4Q92562 907 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 MRPL48Q96GC5 212 aaKnown RBP12.97□□□□□ -0.33
SYNM-203ENST00000560674 GMCL1Q96IK5 515 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 MYLK2Q9H1R3 596 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 ACTR8Q9H981 624 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 AGO4Q9HCK5 861 aaKnown RBP12.97□□□□□ -0.33
SYNM-203ENST00000560674 GEMIN8Q9NWZ8 242 aaKnown RBP12.97□□□□□ -0.33
SYNM-203ENST00000560674 DSEQ9UL01 958 aa12.97□□□□□ -0.33
SYNM-203ENST00000560674 SCAF8Q9UPN6 1271 aaKnown RBP12.97□□□□□ -0.33
SYNM-203ENST00000560674 CD163L1Q9NR16 1453 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 C2CD2LO14523 706 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 SNUPNO95149 360 aaKnown RBP12.96□□□□□ -0.33
SYNM-203ENST00000560674 MBL2P11226 248 aaPredicted RBP12.96□□□□□ -0.33
SYNM-203ENST00000560674 DARSP14868 501 aaKnown RBP12.96□□□□□ -0.33
SYNM-203ENST00000560674 PECAM1P16284 738 aaPredicted RBP12.96□□□□□ -0.33
SYNM-203ENST00000560674 IFI35P80217 286 aaPredicted RBP12.96□□□□□ -0.33
SYNM-203ENST00000560674 FASTKQ14296 549 aaKnown RBP12.96□□□□□ -0.33
SYNM-203ENST00000560674 DDR2Q16832 855 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 ZNF284Q2VY69 593 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 ZFP1Q6P2D0 407 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 TATDN2Q93075 761 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 DPY30Q9C005 99 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 DMAP1Q9NPF5 467 aaPredicted RBP12.96□□□□□ -0.33
SYNM-203ENST00000560674 HACL1Q9UJ83 578 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 ZMYND8Q9ULU4 1186 aaPredicted RBP12.96□□□□□ -0.33
SYNM-203ENST00000560674 PADI4Q9UM07 663 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 WDR27A2RRH5 827 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 TMEM114B3SHH9 223 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 DDHD2O94830 711 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 ALDH7A1P49419 539 aaKnown RBP12.96□□□□□ -0.33
SYNM-203ENST00000560674 RHOAP61586 193 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 EFEMP1Q12805 493 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 MAD2L1Q13257 205 aaPredicted RBP12.96□□□□□ -0.33
SYNM-203ENST00000560674 NTRK3Q16288 839 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 NFIL3Q16649 462 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 SPANXN3Q5MJ09 141 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 OR6Y1Q8NGX8 325 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 HDAC7Q8WUI4 952 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 OPTNQ96CV9 577 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 TBCBQ99426 244 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 CPNE1Q99829 537 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 TLR10Q9BXR5 811 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 NDUFAF1Q9Y375 327 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 RHOCP08134 193 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 THPOP40225 353 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 PURAQ00577 322 aaKnown RBP12.96□□□□□ -0.33
SYNM-203ENST00000560674 PRKCQQ04759 706 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 ARMC4Q5T2S8 1044 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 NAIF1Q69YI7 327 aaPredicted RBP12.96□□□□□ -0.33
SYNM-203ENST00000560674 KCNMB4Q86W47 210 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 EID3Q8N140 333 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 ZSWIM2Q8NEG5 633 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 PHF21BQ96EK2 531 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 PGM2Q96G03 612 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 PARVBQ9HBI1 364 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 ANKRD6Q9Y2G4 727 aa12.96□□□□□ -0.33
SYNM-203ENST00000560674 CLOCKO15516 846 aa12.96□□□□□ -0.34
SYNM-203ENST00000560674 RARAP10276 462 aa12.96□□□□□ -0.34
SYNM-203ENST00000560674 ZNF157P51786 506 aaPredicted RBP12.96□□□□□ -0.34
SYNM-203ENST00000560674 POU6F1Q14863 301 aa12.96□□□□□ -0.34
SYNM-203ENST00000560674 SKIV2LQ15477 1246 aaKnown RBP12.96□□□□□ -0.34
SYNM-203ENST00000560674 SPDYCQ5MJ68 293 aa12.96□□□□□ -0.34
SYNM-203ENST00000560674 CYP4Z2PQ8N1L4 340 aa12.96□□□□□ -0.34
SYNM-203ENST00000560674 LRRN4CLQ8ND94 238 aa12.96□□□□□ -0.34
SYNM-203ENST00000560674 AGBL3Q8NEM8 1001 aa12.96□□□□□ -0.34
SYNM-203ENST00000560674 PRCCQ92733 491 aaPredicted RBP12.96□□□□□ -0.34
SYNM-203ENST00000560674 UNKQ9C0B0 810 aaKnown RBP12.96□□□□□ -0.34
SYNM-203ENST00000560674 RABGEF1Q9UJ41 708 aa12.96□□□□□ -0.34
SYNM-203ENST00000560674 MROH7Q68CQ1 1323 aa12.96□□□□□ -0.34
SYNM-203ENST00000560674 NEURL4Q96JN8 1562 aa12.96□□□□□ -0.34
SYNM-203ENST00000560674 FAM25AB3EWG3 89 aa12.95□□□□□ -0.34
SYNM-203ENST00000560674 FAM25CB3EWG5 89 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms