RNA–Protein interactions for RNA: ENST00000560239.1

AC048382.2-201, humanhuman

TSL 2 BASIC

Gene AC048382.2, Length 492 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048382.2-201ENST00000560239 DNAJC19Q96DA6 116 aa6.31□□□□□ -1.4
AC048382.2-201ENST00000560239 ZNF419Q96HQ0 510 aaPredicted RBP6.31□□□□□ -1.4
AC048382.2-201ENST00000560239 HSPA12BQ96MM6 686 aa6.31□□□□□ -1.4
AC048382.2-201ENST00000560239 MMS19Q96T76 1030 aa6.31□□□□□ -1.4
AC048382.2-201ENST00000560239 CBWD1Q9BRT8 395 aa6.31□□□□□ -1.4
AC048382.2-201ENST00000560239 PDCL3Q9H2J4 239 aa6.31□□□□□ -1.4
AC048382.2-201ENST00000560239 SNX25Q9H3E2 840 aa6.31□□□□□ -1.4
AC048382.2-201ENST00000560239 FBXO44Q9H4M3 255 aa6.31□□□□□ -1.4
AC048382.2-201ENST00000560239 CCDC86Q9H6F5 360 aaKnown RBP6.31□□□□□ -1.4
AC048382.2-201ENST00000560239 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.31□□□□□ -1.4
AC048382.2-201ENST00000560239 SPHK2Q9NRA0 654 aa6.31□□□□□ -1.4
AC048382.2-201ENST00000560239 SMPD4Q9NXE4 827 aa6.31□□□□□ -1.4
AC048382.2-201ENST00000560239 MARK1Q9P0L2 795 aa6.31□□□□□ -1.4
AC048382.2-201ENST00000560239 WDR35Q9P2L0 1181 aa6.31□□□□□ -1.4
AC048382.2-201ENST00000560239 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.31□□□□□ -1.4
AC048382.2-201ENST00000560239 USP3Q9Y6I4 520 aa6.31□□□□□ -1.4
AC048382.2-201ENST00000560239 MORC2Q9Y6X9 1032 aaPredicted RBP6.31□□□□□ -1.4
AC048382.2-201ENST00000560239 CKAP5Q14008 2032 aa6.31□□□□□ -1.4
AC048382.2-201ENST00000560239 URB1O60287 2271 aaKnown RBP6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 KNTC1P50748 2209 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 CABIN1Q9Y6J0 2220 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 ATXN2Q99700 1313 aaKnown RBP6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 ZFYVE26Q68DK2 2539 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 A0A1B0GTW7 788 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 A0A1W2PQF6 199 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 SYCE3A1L190 88 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 FAM92AA1XBS5 289 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 E9PAM4 449 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 DYNC1I1O14576 645 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 COCHO43405 550 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 HCRTO43612 131 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 PRMT3O60678 531 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 PTMAP06454 111 aaKnown RBP6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 ZDHHC11BP0C7U3 371 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 FTH1P19P0C7X4 201 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 PTPN1P18031 435 aaKnown RBP6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 TRIM21P19474 475 aaKnown RBP6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 ATICP31939 592 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 PLA2G4AP47712 749 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 PTSQ03393 145 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 PKP1Q13835 747 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 SF3A1Q15459 793 aaKnown RBP6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 CCDC142Q17RM4 750 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 ANO4Q32M45 955 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 MDH1BQ5I0G3 518 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 CCDC183Q5T5S1 534 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 EMC10Q5UCC4 262 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 LARP1BQ659C4 914 aaKnown RBP6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 GRAMD4Q6IC98 578 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 KLHDC10Q6PID8 442 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 SASS6Q6UVJ0 657 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 HTR3DQ70Z44 454 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 PDZD3Q86UT5 571 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 SLC41A1Q8IVJ1 513 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 SFTPA1Q8IWL2 248 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 CCDC65Q8IXS2 484 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 CHPFQ8IZ52 775 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 GALNT15Q8N3T1 639 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 FRMD1Q8N878 549 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 TRIML1Q8N9V2 468 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 CADM4Q8NFZ8 388 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 OR6B3Q8NGW1 331 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 SCFD1Q8WVM8 642 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 DNASE2BQ8WZ79 361 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 SMARCD1Q96GM5 515 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 TNIP3Q96KP6 325 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 CDC6Q99741 560 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 LRRC27Q9C0I9 530 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 RBSNQ9H1K0 784 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 PCED1AQ9H1Q7 454 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 CD248Q9HCU0 757 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 DMAP1Q9NPF5 467 aaPredicted RBP6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 TIMMDC1Q9NPL8 285 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 TLR8Q9NR97 1041 aaKnown RBP6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 DNAJC17Q9NVM6 304 aaKnown RBP6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 IL37Q9NZH6 218 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 TMEM63CQ9P1W3 806 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 LSM7Q9UK45 103 aaKnown RBP6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 ZNF232Q9UNY5 417 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 PCDHGB2Q9Y5G2 931 aa6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 GOLGA4Q13439 2230 aaKnown RBP6.3□□□□□ -1.4
AC048382.2-201ENST00000560239 UBE4BO95155 1302 aa6.29□□□□□ -1.4
AC048382.2-201ENST00000560239 ANKRD11Q6UB99 2663 aaPredicted RBP6.29□□□□□ -1.4
AC048382.2-201ENST00000560239 SERTM1A2A2V5 107 aa6.29□□□□□ -1.4
AC048382.2-201ENST00000560239 GOLGA8IPA6NC78 632 aa6.29□□□□□ -1.4
AC048382.2-201ENST00000560239 GOLGA8JA6NMD2 632 aa6.29□□□□□ -1.4
AC048382.2-201ENST00000560239 EIF4E1BA6NMX2 242 aaKnown RBP6.29□□□□□ -1.4
AC048382.2-201ENST00000560239 EIF3DO15371 548 aaKnown RBP eCLIP6.29□□□□□ -1.4
AC048382.2-201ENST00000560239 FLRT2O43155 660 aa6.29□□□□□ -1.4
AC048382.2-201ENST00000560239 SH3BP5O60239 455 aa6.29□□□□□ -1.4
AC048382.2-201ENST00000560239 CBFA2T3O75081 653 aa6.29□□□□□ -1.4
AC048382.2-201ENST00000560239 TPM3P06753 285 aa6.29□□□□□ -1.4
AC048382.2-201ENST00000560239 PDGFRBP09619 1106 aa6.29□□□□□ -1.4
AC048382.2-201ENST00000560239 IDEP14735 1019 aa6.29□□□□□ -1.4
AC048382.2-201ENST00000560239 TNNI1P19237 187 aa6.29□□□□□ -1.4
AC048382.2-201ENST00000560239 PDCP20941 246 aa6.29□□□□□ -1.4
AC048382.2-201ENST00000560239 CD6P30203 668 aa6.29□□□□□ -1.4
AC048382.2-201ENST00000560239 OXTRP30559 389 aa6.29□□□□□ -1.4
AC048382.2-201ENST00000560239 NOS2P35228 1153 aa6.29□□□□□ -1.4
AC048382.2-201ENST00000560239 STAT6P42226 847 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms