RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 CRY1Q16526 586 aa13.14□□□□□ -0.31
LRRC28-214ENST00000559433 STX1AQ16623 288 aa13.14□□□□□ -0.31
LRRC28-214ENST00000559433 CCDC183Q5T5S1 534 aa13.14□□□□□ -0.31
LRRC28-214ENST00000559433 MSANTD2Q6P1R3 559 aa13.14□□□□□ -0.31
LRRC28-214ENST00000559433 SCUBE3Q8IX30 993 aa13.14□□□□□ -0.31
LRRC28-214ENST00000559433 PGBD3Q8N328 593 aa13.14□□□□□ -0.31
LRRC28-214ENST00000559433 ZNF513Q8N8E2 541 aaPredicted RBP13.14□□□□□ -0.31
LRRC28-214ENST00000559433 KCNV2Q8TDN2 545 aa13.14□□□□□ -0.31
LRRC28-214ENST00000559433 STK32AQ8WU08 396 aa13.14□□□□□ -0.31
LRRC28-214ENST00000559433 FAM149B1Q96BN6 582 aa13.14□□□□□ -0.31
LRRC28-214ENST00000559433 ANO10Q9NW15 660 aa13.14□□□□□ -0.31
LRRC28-214ENST00000559433 TAB2Q9NYJ8 693 aa13.14□□□□□ -0.31
LRRC28-214ENST00000559433 BCCIPQ9P287 314 aaKnown RBP eCLIP13.14□□□□□ -0.31
LRRC28-214ENST00000559433 EBF1Q9UH73 591 aa13.14□□□□□ -0.31
LRRC28-214ENST00000559433 CYTH4Q9UIA0 394 aa13.14□□□□□ -0.31
LRRC28-214ENST00000559433 SPTBN4Q9H254 2564 aa13.13□□□□□ -0.31
LRRC28-214ENST00000559433 E5RJQ4 531 aa13.13□□□□□ -0.31
LRRC28-214ENST00000559433 FOXN3O00409 490 aaPredicted RBP13.13□□□□□ -0.31
LRRC28-214ENST00000559433 MAP3K13O43283 966 aa13.13□□□□□ -0.31
LRRC28-214ENST00000559433 LRP3O75074 770 aa13.13□□□□□ -0.31
LRRC28-214ENST00000559433 PENKP01210 267 aaPredicted RBP13.13□□□□□ -0.31
LRRC28-214ENST00000559433 TPM2P07951 284 aa13.13□□□□□ -0.31
LRRC28-214ENST00000559433 PNMA6AP0CW24 399 aaPredicted RBP13.13□□□□□ -0.31
LRRC28-214ENST00000559433 NCAM1P13591 858 aa13.13□□□□□ -0.31
LRRC28-214ENST00000559433 GBP1P32455 592 aa13.13□□□□□ -0.31
LRRC28-214ENST00000559433 PTK2Q05397 1052 aa13.13□□□□□ -0.31
LRRC28-214ENST00000559433 PDCLQ13371 301 aa13.13□□□□□ -0.31
LRRC28-214ENST00000559433 RAPGEF1Q13905 1077 aa13.13□□□□□ -0.31
LRRC28-214ENST00000559433 FYB2Q5VWT5 728 aa13.13□□□□□ -0.31
LRRC28-214ENST00000559433 ANO7Q6IWH7 933 aa13.13□□□□□ -0.31
LRRC28-214ENST00000559433 TMEM92Q6UXU6 159 aa13.13□□□□□ -0.31
LRRC28-214ENST00000559433 C11orf57Q6ZUT1 292 aaPredicted RBP13.13□□□□□ -0.31
LRRC28-214ENST00000559433 TOGARAM2Q6ZUX3 1019 aa13.13□□□□□ -0.31
LRRC28-214ENST00000559433 C11orf74Q86VG3 221 aa13.13□□□□□ -0.31
LRRC28-214ENST00000559433 PASD1Q8IV76 773 aa13.13□□□□□ -0.31
LRRC28-214ENST00000559433 FAM217AQ8IXS0 508 aa13.13□□□□□ -0.31
LRRC28-214ENST00000559433 CPXM2Q8N436 756 aa13.13□□□□□ -0.31
LRRC28-214ENST00000559433 FAM160A2Q8N612 972 aaPredicted RBP13.13□□□□□ -0.31
LRRC28-214ENST00000559433 DDI1Q8WTU0 396 aa13.13□□□□□ -0.31
LRRC28-214ENST00000559433 P2RY11Q96G91 374 aa13.13□□□□□ -0.31
LRRC28-214ENST00000559433 LOXL4Q96JB6 756 aa13.13□□□□□ -0.31
LRRC28-214ENST00000559433 TRIM62Q9BVG3 475 aa13.13□□□□□ -0.31
LRRC28-214ENST00000559433 LSM14BQ9BX40 385 aaKnown RBP13.13□□□□□ -0.31
LRRC28-214ENST00000559433 SLC4A5Q9BY07 1137 aa13.13□□□□□ -0.31
LRRC28-214ENST00000559433 TPSD1Q9BZJ3 242 aa13.13□□□□□ -0.31
LRRC28-214ENST00000559433 FHOD1Q9Y613 1164 aa13.13□□□□□ -0.31
LRRC28-214ENST00000559433 ADAM23O75077 832 aa13.12□□□□□ -0.31
LRRC28-214ENST00000559433 LATS1O95835 1130 aa13.12□□□□□ -0.31
LRRC28-214ENST00000559433 CISD3P0C7P0 127 aa13.12□□□□□ -0.31
LRRC28-214ENST00000559433 HNRNPLP14866 589 aaKnown RBP eCLIP13.12□□□□□ -0.31
LRRC28-214ENST00000559433 FOXK2Q01167 660 aa13.12□□□□□ -0.31
LRRC28-214ENST00000559433 KCNMA1Q12791 1236 aa13.12□□□□□ -0.31
LRRC28-214ENST00000559433 BYSLQ13895 437 aaKnown RBP13.12□□□□□ -0.31
LRRC28-214ENST00000559433 PUM1Q14671 1186 aaKnown RBP eCLIP13.12□□□□□ -0.31
LRRC28-214ENST00000559433 E2F5Q15329 346 aa13.12□□□□□ -0.31
LRRC28-214ENST00000559433 RSPO4Q2I0M5 234 aaPredicted RBP13.12□□□□□ -0.31
LRRC28-214ENST00000559433 CDKAL1Q5VV42 579 aa13.12□□□□□ -0.31
LRRC28-214ENST00000559433 EGFLAMQ63HQ2 1017 aa13.12□□□□□ -0.31
LRRC28-214ENST00000559433 NUGGCQ68CJ6 796 aa13.12□□□□□ -0.31
LRRC28-214ENST00000559433 SMYD5Q6GMV2 418 aa13.12□□□□□ -0.31
LRRC28-214ENST00000559433 DGLUCYQ7Z3D6 616 aa13.12□□□□□ -0.31
LRRC28-214ENST00000559433 KBTBD6Q86V97 674 aa13.12□□□□□ -0.31
LRRC28-214ENST00000559433 SLC47A2Q86VL8 602 aa13.12□□□□□ -0.31
LRRC28-214ENST00000559433 MDGA1Q8NFP4 955 aa13.12□□□□□ -0.31
LRRC28-214ENST00000559433 VPS16Q9H269 839 aa13.12□□□□□ -0.31
LRRC28-214ENST00000559433 CDV3Q9UKY7 258 aaKnown RBP13.12□□□□□ -0.31
LRRC28-214ENST00000559433 PCDHGC3Q9UN70 934 aa13.12□□□□□ -0.31
LRRC28-214ENST00000559433 NAALADL1Q9UQQ1 740 aa13.12□□□□□ -0.31
LRRC28-214ENST00000559433 STARD13Q9Y3M8 1113 aa13.12□□□□□ -0.31
LRRC28-214ENST00000559433 PLXND1Q9Y4D7 1925 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 DMXL1Q9Y485 3027 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 THADAQ6YHU6 1953 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 TCRBV21S2A2A0A5A6 115 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 PRRT4C9JH25 899 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 CAPN9O14815 690 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 PAPSS1O43252 624 aaPredicted RBP13.11□□□□□ -0.31
LRRC28-214ENST00000559433 TSPAN3O60637 253 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 IGLV3-27P01718 113 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 FYNP06241 537 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 HOXB2P14652 356 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 CLCN1P35523 988 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 KRT9P35527 623 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 WASP42768 502 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 TBX4P57082 545 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 BPIFB4P59827 614 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 MYL5Q02045 173 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 RING1Q06587 406 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 DRAP1Q14919 205 aaPredicted RBP13.11□□□□□ -0.31
LRRC28-214ENST00000559433 KRT31Q15323 416 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 CSRP2Q16527 193 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 MPPE1Q53F39 396 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 ADGRF1Q5T601 910 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 KLHDC7AQ5VTJ3 777 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 DPY19L2P1Q6NXN4 242 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 TMEM110Q86TL2 294 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 TAC4Q86UU9 113 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 RASSF3Q86WH2 238 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 UNC45BQ8IWX7 931 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 FAM71AQ8IYT1 594 aa13.11□□□□□ -0.31
LRRC28-214ENST00000559433 CHPFQ8IZ52 775 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms