RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 GJB4Q9NTQ9 266 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 ARHGAP28Q9P2N2 729 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 SUSD2Q9UGT4 822 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 MAGED2Q9UNF1 606 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-236ENST00000556220 NOTCH2Q04721 2471 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 PTPN13Q12923 2485 aa7.37□□□□□ -1.23
ATXN3-236ENST00000556220 TRAV19A0A0A6YYK7 116 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 IGHV1OR15-9A0A0B4J2B8 117 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 TTC26A0AVF1 554 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 PPEF2O14830 753 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 NEMFO60524 1076 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 TADA3O75528 432 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 TOM1L1O75674 476 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 KAT7O95251 611 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 APODP05090 189 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 CKMP06732 381 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 CLTAP09496 248 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 CXCL8P10145 99 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 GNSP15586 552 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 RAB6AP20340 208 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 PSMA5P28066 241 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 EIF2S3P41091 472 aaKnown RBP7.36□□□□□ -1.23
ATXN3-236ENST00000556220 GRIA2P42262 883 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 TNFRSF4P43489 277 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 ASPAP45381 313 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 GPR15P49685 360 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 GUCY2FP51841 1108 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 MESP2Q0VG99 397 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 GRIK2Q13002 908 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 ORC1Q13415 861 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 TOB2Q14106 344 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-236ENST00000556220 NOLC1Q14978 699 aaKnown RBP eCLIP7.36□□□□□ -1.23
ATXN3-236ENST00000556220 SMAD1Q15797 465 aaKnown RBP7.36□□□□□ -1.23
ATXN3-236ENST00000556220 RPS26P11Q5JNZ5 115 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-236ENST00000556220 DBX2Q6ZNG2 339 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 ADGRG2Q8IZP9 1017 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 THEM5Q8N1Q8 247 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 ARL14EPQ8N8R7 260 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-236ENST00000556220 BAHD1Q8TBE0 780 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-236ENST00000556220 SPATA18Q8TC71 538 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 SLC22A12Q96S37 553 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 PNKPQ96T60 521 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 CDC6Q99741 560 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 PRDM16Q9HAZ2 1276 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 TRPC7Q9HCX4 862 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 IGSF5Q9NSI5 407 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 GCNT4Q9P109 453 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 UXTQ9UBK9 157 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-236ENST00000556220 DSEQ9UL01 958 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 SNX14Q9Y5W7 946 aa7.36□□□□□ -1.23
ATXN3-236ENST00000556220 PCDH15Q96QU1 1955 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 STK36Q9NRP7 1315 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 COL12A1Q99715 3063 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 TEX51A0A1B0GUA7 166 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 FAM149AA5PLN7 773 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 LACTBL1A8MY62 500 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 PIRO00625 290 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 CLDN3O15551 220 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 XPOTO43592 962 aaKnown RBP7.35□□□□□ -1.23
ATXN3-236ENST00000556220 ZNF217O75362 1048 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 PRPF40AO75400 957 aaKnown RBP7.35□□□□□ -1.23
ATXN3-236ENST00000556220 NOL4O94818 638 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 ECEL1O95672 775 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 ZNF883P0CG24 379 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 HLA-EP13747 358 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 GABRG2P18507 467 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 HDCP19113 662 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 MUTP22033 750 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 EIF2DP41214 584 aaKnown RBP7.35□□□□□ -1.23
ATXN3-236ENST00000556220 ZXDBP98169 803 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 MCL1Q07820 350 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 DHCR24Q15392 516 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 DDR2Q16832 855 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 ZC2HC1CQ53FD0 456 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-236ENST00000556220 WDR45BQ5MNZ6 344 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 SYCP2LQ5T4T6 812 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 SDHAF4Q5VUM1 108 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 SPATA1Q5VX52 437 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 PCSK4Q6UW60 755 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 CBLL1Q75N03 491 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 GPR155Q7Z3F1 870 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 METTL23Q86XA0 190 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 DCP1BQ8IZD4 617 aaKnown RBP7.35□□□□□ -1.23
ATXN3-236ENST00000556220 KIAA1958Q8N8K9 716 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 ERMNQ8TAM6 284 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 TRMT2BQ96GJ1 504 aaKnown RBP7.35□□□□□ -1.23
ATXN3-236ENST00000556220 HSPA12BQ96MM6 686 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 FCRL3Q96P31 734 aaPredicted RBP7.35□□□□□ -1.23
ATXN3-236ENST00000556220 TSPAN18Q96SJ8 248 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 NTPCRQ9BSD7 190 aaKnown RBP7.35□□□□□ -1.23
ATXN3-236ENST00000556220 TMEM60Q9H2L4 133 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 BHMT2Q9H2M3 363 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 IL21RQ9HBE5 538 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 NPHS2Q9NP85 383 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 ZDHHC4Q9NPG8 344 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 KMT5AQ9NQR1 393 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 CALCOCO1Q9P1Z2 691 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 ARHGAP26Q9UNA1 814 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 AP4E1Q9UPM8 1137 aa7.35□□□□□ -1.23
ATXN3-236ENST00000556220 PCDHB5Q9Y5E4 795 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 409.6 ms