RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 E9PAM4 449 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 USP17L7P0C7H9 530 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 ATXN1LP0C7T5 689 aaKnown RBP7.37□□□□□ -1.23
ATXN3-224ENST00000554040 CSH1P0DML2 217 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 CSH2P0DML3 217 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 ODC1P11926 461 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 HARSP12081 509 aaKnown RBP7.37□□□□□ -1.23
ATXN3-224ENST00000554040 TCF3P15923 654 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 XBP1P17861 261 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 PAX3P23760 479 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 RPA1P27694 616 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 KIR2DL1P43626 348 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-224ENST00000554040 NPTX2P47972 431 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 SLC6A11P48066 632 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 PEX3P56589 373 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 ID3Q02535 119 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 CFHR1Q03591 330 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 SPAG1Q07617 926 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 SCRN1Q12765 414 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 GAB4Q2WGN9 574 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 SEZ6Q53EL9 994 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 EMC10Q5UCC4 262 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 CPLX2Q6PUV4 134 aaKnown RBP7.37□□□□□ -1.23
ATXN3-224ENST00000554040 SLC41A1Q8IVJ1 513 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 SFTPA1Q8IWL2 248 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 TRIML1Q8N9V2 468 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 SH3RF2Q8TEC5 729 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 LRRC15Q8TF66 581 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 ZNF274Q96GC6 653 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-224ENST00000554040 ZNF419Q96HQ0 510 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-224ENST00000554040 DMRTB1Q96MA1 342 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 HNRNPABQ99729 332 aaKnown RBP7.37□□□□□ -1.23
ATXN3-224ENST00000554040 PI4K2AQ9BTU6 479 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 FAM124BQ9H5Z6 455 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-224ENST00000554040 CLMPQ9H6B4 373 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 TMEM206Q9H813 350 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 GJB4Q9NTQ9 266 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 ARHGAP28Q9P2N2 729 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 SUSD2Q9UGT4 822 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 MAGED2Q9UNF1 606 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-224ENST00000554040 NOTCH2Q04721 2471 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 PTPN13Q12923 2485 aa7.37□□□□□ -1.23
ATXN3-224ENST00000554040 TRAV19A0A0A6YYK7 116 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 IGHV1OR15-9A0A0B4J2B8 117 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 TTC26A0AVF1 554 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 PPEF2O14830 753 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 NEMFO60524 1076 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 TADA3O75528 432 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 TOM1L1O75674 476 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 KAT7O95251 611 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 APODP05090 189 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 CKMP06732 381 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 CLTAP09496 248 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 FAM87AP0C7U9 286 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 CXCL8P10145 99 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 GNSP15586 552 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 PSMA5P28066 241 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 EIF2S3P41091 472 aaKnown RBP7.36□□□□□ -1.23
ATXN3-224ENST00000554040 GRIA2P42262 883 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 TNFRSF4P43489 277 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 GPR15P49685 360 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 GUCY2FP51841 1108 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 MESP2Q0VG99 397 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 GRIK2Q13002 908 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 TOB2Q14106 344 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-224ENST00000554040 NOLC1Q14978 699 aaKnown RBP eCLIP7.36□□□□□ -1.23
ATXN3-224ENST00000554040 SMAD1Q15797 465 aaKnown RBP7.36□□□□□ -1.23
ATXN3-224ENST00000554040 DBX2Q6ZNG2 339 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 ADGRG2Q8IZP9 1017 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 THEM5Q8N1Q8 247 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 PLD6Q8N2A8 252 aaKnown RBP7.36□□□□□ -1.23
ATXN3-224ENST00000554040 ARL14EPQ8N8R7 260 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-224ENST00000554040 FAM181AQ8N9Y4 354 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 BAHD1Q8TBE0 780 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-224ENST00000554040 SPATA18Q8TC71 538 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 YTHDC1Q96MU7 727 aaKnown RBP7.36□□□□□ -1.23
ATXN3-224ENST00000554040 SLC22A12Q96S37 553 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 PNKPQ96T60 521 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 CDC6Q99741 560 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 PRDM16Q9HAZ2 1276 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 TRPC7Q9HCX4 862 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 IGSF5Q9NSI5 407 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 GCNT4Q9P109 453 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 UXTQ9UBK9 157 aaPredicted RBP7.36□□□□□ -1.23
ATXN3-224ENST00000554040 DSEQ9UL01 958 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 SLC5A6Q9Y289 635 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 SNX14Q9Y5W7 946 aa7.36□□□□□ -1.23
ATXN3-224ENST00000554040 PCDH15Q96QU1 1955 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 STK36Q9NRP7 1315 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 COL12A1Q99715 3063 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 TEX51A0A1B0GUA7 166 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 FAM149AA5PLN7 773 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 LACTBL1A8MY62 500 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 PIRO00625 290 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 CLDN3O15551 220 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 XPOTO43592 962 aaKnown RBP7.35□□□□□ -1.23
ATXN3-224ENST00000554040 ZNF217O75362 1048 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 PRPF40AO75400 957 aaKnown RBP7.35□□□□□ -1.23
ATXN3-224ENST00000554040 LEFTY1O75610 366 aa7.35□□□□□ -1.23
ATXN3-224ENST00000554040 NOL4O94818 638 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms