RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 MSANTD2Q6P1R3 559 aa13.17□□□□□ -0.3
CACNB3-223ENST00000552480 ZDHHC24Q6UX98 284 aa13.17□□□□□ -0.3
CACNB3-223ENST00000552480 NPNTQ6UXI9 565 aa13.17□□□□□ -0.3
CACNB3-223ENST00000552480 PYROXD2Q8N2H3 581 aa13.17□□□□□ -0.3
CACNB3-223ENST00000552480 MREGQ8N565 214 aa13.17□□□□□ -0.3
CACNB3-223ENST00000552480 CCDC89Q8N998 374 aa13.17□□□□□ -0.3
CACNB3-223ENST00000552480 STKLD1Q8NE28 680 aa13.17□□□□□ -0.3
CACNB3-223ENST00000552480 RNF139Q8WU17 664 aa13.17□□□□□ -0.3
CACNB3-223ENST00000552480 HERVK_113Q902F9 699 aa13.17□□□□□ -0.3
CACNB3-223ENST00000552480 P3H4Q92791 437 aa13.17□□□□□ -0.3
CACNB3-223ENST00000552480 ART4Q93070 314 aa13.17□□□□□ -0.3
CACNB3-223ENST00000552480 SNF8Q96H20 258 aa13.17□□□□□ -0.3
CACNB3-223ENST00000552480 ZBED2Q9BTP6 218 aa13.17□□□□□ -0.3
CACNB3-223ENST00000552480 TTLL2Q9BWV7 592 aa13.17□□□□□ -0.3
CACNB3-223ENST00000552480 WDCPQ9H6R7 721 aa13.17□□□□□ -0.3
CACNB3-223ENST00000552480 VIPAS39Q9H9C1 493 aa13.17□□□□□ -0.3
CACNB3-223ENST00000552480 NMUR1Q9HB89 426 aa13.17□□□□□ -0.3
CACNB3-223ENST00000552480 ZDHHC18Q9NUE0 388 aa13.17□□□□□ -0.3
CACNB3-223ENST00000552480 CWC15Q9P013 229 aaKnown RBP13.17□□□□□ -0.3
CACNB3-223ENST00000552480 GMIPQ9P107 970 aa13.17□□□□□ -0.3
CACNB3-223ENST00000552480 SAE1Q9UBE0 346 aaPredicted RBP13.17□□□□□ -0.3
CACNB3-223ENST00000552480 FAM153AQ9UHL3 310 aa13.17□□□□□ -0.3
CACNB3-223ENST00000552480 INSL6Q9Y581 213 aa13.17□□□□□ -0.3
CACNB3-223ENST00000552480 BRCA2P51587 3418 aa13.17□□□□□ -0.3
CACNB3-223ENST00000552480 SLC38A8A6NNN8 435 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 EEF2KO00418 725 aaKnown RBP13.16□□□□□ -0.3
CACNB3-223ENST00000552480 GOT1P17174 413 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 ATF6P18850 670 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 IVDP26440 423 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 HSPA9P38646 679 aaKnown RBP13.16□□□□□ -0.3
CACNB3-223ENST00000552480 HCAR3P49019 387 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 PGFP49763 221 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 CAV1Q03135 178 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 CALCOCO2Q13137 446 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 SEMA3BQ13214 749 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 RAB33AQ14088 237 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 TRIP13Q15645 432 aaPredicted RBP13.16□□□□□ -0.3
CACNB3-223ENST00000552480 KCTD19Q17RG1 926 aaPredicted RBP13.16□□□□□ -0.3
CACNB3-223ENST00000552480 C1orf228Q6PIY5 440 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 VPS52Q8N1B4 723 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 BBOF1Q8ND07 529 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 ZNF461Q8TAF7 563 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 SP7Q8TDD2 431 aaPredicted RBP13.16□□□□□ -0.3
CACNB3-223ENST00000552480 GPR152Q8TDT2 470 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 CASP10Q92851 521 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 CLP1Q92989 425 aaKnown RBP13.16□□□□□ -0.3
CACNB3-223ENST00000552480 RNF34Q969K3 372 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 GDAP1L1Q96MZ0 367 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 SERPINB11Q96P15 392 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 FMO2Q99518 471 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 MAGEB5Q9BZ81 275 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 ACBD3Q9H3P7 528 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 PCDH9Q9HC56 1237 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 TLR8Q9NR97 1041 aaKnown RBP13.16□□□□□ -0.3
CACNB3-223ENST00000552480 TMPRSS4Q9NRS4 437 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.16□□□□□ -0.3
CACNB3-223ENST00000552480 OLA1Q9NTK5 396 aaKnown RBP13.16□□□□□ -0.3
CACNB3-223ENST00000552480 OSER1Q9NX31 292 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 ARHGEF38Q9NXL2 777 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 CLIC5Q9NZA1 410 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 FNIP2Q9P278 1114 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 MAFFQ9ULX9 164 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 SSX2IPQ9Y2D8 614 aa13.16□□□□□ -0.3
CACNB3-223ENST00000552480 CFAP69A5D8W1 941 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 SGK1O00141 431 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 NDC80O14777 642 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 FGF18O76093 207 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 LINC00271P0C7V0 271 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 RBP3P10745 1247 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 ITIH2P19823 946 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 ADCY8P40145 1251 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 NR2C2P49116 596 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 PLTPP55058 493 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 TAF10Q12962 218 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 DPYSQ14117 519 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 PPP2R5DQ14738 602 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 NCBP2-AS2Q69YL0 99 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 RFX8Q6ZV50 586 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 HERC6Q8IVU3 1022 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 PHOSPHO2Q8TCD6 241 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 FBXO25Q8TCJ0 367 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 RSAD2Q8WXG1 361 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 OVCA2Q8WZ82 227 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 LRRC45Q96CN5 670 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 RAD9AQ99638 391 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 TMEM121Q9BTD3 319 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 HTATIP2Q9BUP3 242 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 TKTL2Q9H0I9 626 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 ZBP1Q9H171 429 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 OSBPL2Q9H1P3 480 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 ANLNQ9NQW6 1124 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 ARHGEF4Q9NR80 690 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 MRPL17Q9NRX2 175 aaKnown RBP13.15□□□□□ -0.3
CACNB3-223ENST00000552480 FAM53CQ9NYF3 392 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 CXXC1Q9P0U4 656 aaPredicted RBP13.15□□□□□ -0.3
CACNB3-223ENST00000552480 MTRF1LQ9UGC7 380 aaKnown RBP13.15□□□□□ -0.3
CACNB3-223ENST00000552480 HPCAL4Q9UM19 191 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 SLC4A7Q9Y6M7 1214 aa13.15□□□□□ -0.3
CACNB3-223ENST00000552480 GREB1Q4ZG55 1949 aa13.14□□□□□ -0.31
CACNB3-223ENST00000552480 BCLAF3A2AJT9 711 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms