RNA–Protein interactions for RNA: ENST00000550755.5

LETMD1-226, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-226ENST00000550755 SLC14A1Q13336 389 aa6.1□□□□□ -1.43
LETMD1-226ENST00000550755 ATP1A4Q13733 1029 aa6.1□□□□□ -1.43
LETMD1-226ENST00000550755 KCNJ12Q14500 433 aa6.1□□□□□ -1.43
LETMD1-226ENST00000550755 ETFDHQ16134 617 aa6.1□□□□□ -1.43
LETMD1-226ENST00000550755 FAM110CQ1W6H9 321 aa6.1□□□□□ -1.43
LETMD1-226ENST00000550755 SLC5A9Q2M3M2 681 aa6.1□□□□□ -1.43
LETMD1-226ENST00000550755 P3H1Q32P28 736 aa6.1□□□□□ -1.43
LETMD1-226ENST00000550755 TMTC4Q5T4D3 741 aa6.1□□□□□ -1.43
LETMD1-226ENST00000550755 ZNF425Q6IV72 752 aa6.1□□□□□ -1.43
LETMD1-226ENST00000550755 C1QL2Q7Z5L3 287 aa6.1□□□□□ -1.43
LETMD1-226ENST00000550755 MAP4K1Q92918 833 aa6.1□□□□□ -1.43
LETMD1-226ENST00000550755 WDR24Q96S15 920 aa6.1□□□□□ -1.43
LETMD1-226ENST00000550755 MYD88Q99836 296 aa6.1□□□□□ -1.43
LETMD1-226ENST00000550755 NUAK2Q9H093 628 aa6.1□□□□□ -1.43
LETMD1-226ENST00000550755 ZNF700Q9H0M5 742 aa6.1□□□□□ -1.43
LETMD1-226ENST00000550755 SAP30LQ9HAJ7 183 aa6.1□□□□□ -1.43
LETMD1-226ENST00000550755 RGL1Q9NZL6 768 aa6.1□□□□□ -1.43
LETMD1-226ENST00000550755 FCHO1O14526 889 aa6.09□□□□□ -1.43
LETMD1-226ENST00000550755 HNRNPDLO14979 420 aaKnown RBP6.09□□□□□ -1.43
LETMD1-226ENST00000550755 NCK2O43639 380 aa6.09□□□□□ -1.43
LETMD1-226ENST00000550755 USP12O75317 370 aa6.09□□□□□ -1.43
LETMD1-226ENST00000550755 SRGAP2BP0DMP2 458 aa6.09□□□□□ -1.43
LETMD1-226ENST00000550755 EGR1P18146 543 aa6.09□□□□□ -1.43
LETMD1-226ENST00000550755 GABRB3P28472 473 aa6.09□□□□□ -1.43
LETMD1-226ENST00000550755 TM4SF4P48230 202 aa6.09□□□□□ -1.43
LETMD1-226ENST00000550755 NSUN2Q08J23 767 aaKnown RBP eCLIP6.09□□□□□ -1.43
LETMD1-226ENST00000550755 SEMA3BQ13214 749 aa6.09□□□□□ -1.43
LETMD1-226ENST00000550755 KLF9Q13886 244 aaPredicted RBP6.09□□□□□ -1.43
LETMD1-226ENST00000550755 CNGA3Q16281 694 aa6.09□□□□□ -1.43
LETMD1-226ENST00000550755 MAPKAPK3Q16644 382 aa6.09□□□□□ -1.43
LETMD1-226ENST00000550755 TMEM196Q5HYL7 178 aa6.09□□□□□ -1.43
LETMD1-226ENST00000550755 IZUMO3Q5VZ72 239 aa6.09□□□□□ -1.43
LETMD1-226ENST00000550755 RAP1GAP2Q684P5 730 aa6.09□□□□□ -1.43
LETMD1-226ENST00000550755 IL31Q6EBC2 164 aa6.09□□□□□ -1.43
LETMD1-226ENST00000550755 SKAP1Q86WV1 359 aa6.09□□□□□ -1.43
LETMD1-226ENST00000550755 OR2C3Q8N628 320 aa6.09□□□□□ -1.43
LETMD1-226ENST00000550755 OVCA2Q8WZ82 227 aa6.09□□□□□ -1.43
LETMD1-226ENST00000550755 VPS16Q9H269 839 aa6.09□□□□□ -1.43
LETMD1-226ENST00000550755 CERS4Q9HA82 394 aa6.09□□□□□ -1.43
LETMD1-226ENST00000550755 VPS4AQ9UN37 437 aa6.09□□□□□ -1.43
LETMD1-226ENST00000550755 HEMK1Q9Y5R4 338 aaPredicted RBP6.09□□□□□ -1.43
LETMD1-226ENST00000550755 E5RJQ4 531 aa6.08□□□□□ -1.44
LETMD1-226ENST00000550755 PODXLO00592 558 aa6.08□□□□□ -1.44
LETMD1-226ENST00000550755 HSP90AA1P07900 732 aaKnown RBP6.08□□□□□ -1.44
LETMD1-226ENST00000550755 MATN1P21941 496 aa6.08□□□□□ -1.44
LETMD1-226ENST00000550755 EEF1GP26641 437 aaKnown RBP6.08□□□□□ -1.44
LETMD1-226ENST00000550755 DUSP1P28562 367 aa6.08□□□□□ -1.44
LETMD1-226ENST00000550755 FHL3Q13643 280 aa6.08□□□□□ -1.44
LETMD1-226ENST00000550755 KPNB1Q14974 876 aaKnown RBP6.08□□□□□ -1.44
LETMD1-226ENST00000550755 SLC35G1Q2M3R5 365 aa6.08□□□□□ -1.44
LETMD1-226ENST00000550755 ARHGAP15Q53QZ3 475 aa6.08□□□□□ -1.44
LETMD1-226ENST00000550755 PAF1Q8N7H5 531 aa6.08□□□□□ -1.44
LETMD1-226ENST00000550755 GLIS1Q8NBF1 620 aa6.08□□□□□ -1.44
LETMD1-226ENST00000550755 ACRBPQ8NEB7 543 aa6.08□□□□□ -1.44
LETMD1-226ENST00000550755 SCARB1Q8WTV0 552 aa6.08□□□□□ -1.44
LETMD1-226ENST00000550755 PRR11Q96HE9 360 aaPredicted RBP6.08□□□□□ -1.44
LETMD1-226ENST00000550755 KAZALD1Q96I82 304 aa6.08□□□□□ -1.44
LETMD1-226ENST00000550755 NUDT22Q9BRQ3 303 aa6.08□□□□□ -1.44
LETMD1-226ENST00000550755 TRNAU1APQ9NX07 287 aaKnown RBP6.08□□□□□ -1.44
LETMD1-226ENST00000550755 PHTF1Q9UMS5 762 aa6.08□□□□□ -1.44
LETMD1-226ENST00000550755 PCDHB2Q9Y5E7 798 aa6.08□□□□□ -1.44
LETMD1-226ENST00000550755 FAM234BA2RU67 622 aa6.07□□□□□ -1.44
LETMD1-226ENST00000550755 NPHP1O15259 732 aa6.07□□□□□ -1.44
LETMD1-226ENST00000550755 CD63P08962 238 aa6.07□□□□□ -1.44
LETMD1-226ENST00000550755 PECAM1P16284 738 aaPredicted RBP6.07□□□□□ -1.44
LETMD1-226ENST00000550755 SFPQP23246 707 aaKnown RBP eCLIP6.07□□□□□ -1.44
LETMD1-226ENST00000550755 IGHMBP2P38935 993 aaKnown RBP6.07□□□□□ -1.44
LETMD1-226ENST00000550755 NEK3P51956 506 aa6.07□□□□□ -1.44
LETMD1-226ENST00000550755 RAE1P78406 368 aaKnown RBP6.07□□□□□ -1.44
LETMD1-226ENST00000550755 HSF1Q00613 529 aa6.07□□□□□ -1.44
LETMD1-226ENST00000550755 ZNF91Q05481 1191 aa6.07□□□□□ -1.44
LETMD1-226ENST00000550755 C10orf62Q5T681 223 aaPredicted RBP6.07□□□□□ -1.44
LETMD1-226ENST00000550755 PCGF5Q86SE9 256 aa6.07□□□□□ -1.44
LETMD1-226ENST00000550755 RASGRP3Q8IV61 690 aa6.07□□□□□ -1.44
LETMD1-226ENST00000550755 NANOGP1Q8N7R0 232 aa6.07□□□□□ -1.44
LETMD1-226ENST00000550755 PIGOQ8TEQ8 1089 aa6.07□□□□□ -1.44
LETMD1-226ENST00000550755 NAP1L5Q96NT1 182 aaPredicted RBP6.07□□□□□ -1.44
LETMD1-226ENST00000550755 RNF26Q9BY78 433 aaPredicted RBP6.07□□□□□ -1.44
LETMD1-226ENST00000550755 TM7SF3Q9NS93 570 aa6.07□□□□□ -1.44
LETMD1-226ENST00000550755 MAP3K20Q9NYL2 800 aaKnown RBP6.07□□□□□ -1.44
LETMD1-226ENST00000550755 ANAPC4Q9UJX5 808 aa6.07□□□□□ -1.44
LETMD1-226ENST00000550755 CA14Q9ULX7 337 aa6.07□□□□□ -1.44
LETMD1-226ENST00000550755 KAT6BQ8WYB5 2073 aa6.06□□□□□ -1.44
LETMD1-226ENST00000550755 ZNF521Q96K83 1311 aa6.06□□□□□ -1.44
LETMD1-226ENST00000550755 CCER2I3L3R5 266 aa6.06□□□□□ -1.44
LETMD1-226ENST00000550755 PPEF2O14830 753 aa6.06□□□□□ -1.44
LETMD1-226ENST00000550755 TP73O15350 636 aa6.06□□□□□ -1.44
LETMD1-226ENST00000550755 INPPL1O15357 1258 aa6.06□□□□□ -1.44
LETMD1-226ENST00000550755 CBFA2T3O75081 653 aa6.06□□□□□ -1.44
LETMD1-226ENST00000550755 MOSPD3O75425 235 aa6.06□□□□□ -1.44
LETMD1-226ENST00000550755 RPS13P62277 151 aaKnown RBP6.06□□□□□ -1.44
LETMD1-226ENST00000550755 BTKQ06187 659 aa6.06□□□□□ -1.44
LETMD1-226ENST00000550755 RAPGEF1Q13905 1077 aa6.06□□□□□ -1.44
LETMD1-226ENST00000550755 SLC9C1Q4G0N8 1177 aa6.06□□□□□ -1.44
LETMD1-226ENST00000550755 Q4G0T1 1027 aa6.06□□□□□ -1.44
LETMD1-226ENST00000550755 EPHA10Q5JZY3 1008 aa6.06□□□□□ -1.44
LETMD1-226ENST00000550755 FAM90A2PQ658T7 463 aa6.06□□□□□ -1.44
LETMD1-226ENST00000550755 ARL6IP4Q66PJ3 421 aaKnown RBP6.06□□□□□ -1.44
LETMD1-226ENST00000550755 CCDC144NLQ6NUI1 221 aa6.06□□□□□ -1.44
LETMD1-226ENST00000550755 C11orf87Q6NUJ2 197 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms