RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 SH3RF1Q7Z6J0 888 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 ATG16L2Q8NAA4 619 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 HTR3CQ8WXA8 447 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 KCNK4Q9NYG8 393 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 STARD13Q9Y3M8 1113 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 PURAQ00577 322 aaKnown RBP13.44□□□□□ -0.26
TNC-212ENST00000542877 CDC16Q13042 620 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 NAIF1Q69YI7 327 aaPredicted RBP13.44□□□□□ -0.26
TNC-212ENST00000542877 RIPOR1Q6ZS17 1223 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 KCNMB4Q86W47 210 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 KRT78Q8N1N4 520 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 OR6Y1Q8NGX8 325 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 PRG3Q9Y2Y8 225 aaPredicted RBP13.44□□□□□ -0.26
TNC-212ENST00000542877 FRMPD1Q5SYB0 1578 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 MGAT4DA6NG13 374 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 EGFRP00533 1210 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 SLC16A1P53985 500 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 GNASQ5JWF2 1037 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 MFSD7Q6UXD7 560 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 SVOPQ8N4V2 548 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 MPP4Q96JB8 637 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 PDCD2LQ9BRP1 358 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 MRPS26Q9BYN8 205 aaKnown RBP13.44□□□□□ -0.26
TNC-212ENST00000542877 VTA1Q9NP79 307 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 TRHDEQ9UKU6 1024 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 MYRFQ9Y2G1 1151 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 NDUFAF1Q9Y375 327 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 A0A087X0B3 334 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 NFIAQ12857 509 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 SLC45A4Q5BKX6 768 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 TCHHL1Q5QJ38 904 aaPredicted RBP13.44□□□□□ -0.26
TNC-212ENST00000542877 FAM45BPQ6NSW5 357 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 ADGRA1Q86SQ6 560 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 KATNAL2Q8IYT4 538 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 MSL3Q8N5Y2 521 aaKnown RBP13.44□□□□□ -0.26
TNC-212ENST00000542877 LRRC39Q96DD0 335 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 ADGRE3Q9BY15 652 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 DMAP1Q9NPF5 467 aaPredicted RBP13.44□□□□□ -0.26
TNC-212ENST00000542877 HPS4Q9NQG7 708 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 WDR27A2RRH5 827 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 HACD1B0YJ81 288 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 DNAJB2P25686 324 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 CAPZA2P47755 286 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 RARRES1P49788 294 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 IL5RAQ01344 420 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 NR6A1Q15406 480 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 TTMPQ5BVD1 217 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 MIB1Q86YT6 1006 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 ETNPPLQ8TBG4 499 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 CAMKK2Q96RR4 588 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 ZNF184Q99676 751 aaPredicted RBP13.44□□□□□ -0.26
TNC-212ENST00000542877 ZFYVE28Q9HCC9 887 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 ADAM30Q9UKF2 790 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 PCDHB7Q9Y5E2 793 aa13.44□□□□□ -0.26
TNC-212ENST00000542877 FRMPD4Q14CM0 1322 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 A0A096LPK6 155 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 TMEM114B3SHH9 223 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 CLOCKO15516 846 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 PRKCIP41743 596 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 ALDH6A1Q02252 535 aaKnown RBP13.43□□□□□ -0.26
TNC-212ENST00000542877 PWP1Q13610 501 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 C1DQ13901 141 aaKnown RBP13.43□□□□□ -0.26
TNC-212ENST00000542877 FASTKQ14296 549 aaKnown RBP13.43□□□□□ -0.26
TNC-212ENST00000542877 SYTL5Q8TDW5 730 aaPredicted RBP13.43□□□□□ -0.26
TNC-212ENST00000542877 KAT2BQ92831 832 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 EMILIN2Q9BXX0 1053 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 ELOVL6Q9H5J4 265 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 ACTL7BQ9Y614 415 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 CBX6O95503 412 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 LDLRP01130 860 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 ARL4DP49703 201 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 TKTL1P51854 596 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 XRCC4Q13426 336 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 RRP1BQ14684 758 aaKnown RBP13.43□□□□□ -0.26
TNC-212ENST00000542877 C11orf96Q7Z7L8 435 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 MREGQ8N565 214 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 CKAP2Q8WWK9 683 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 NT5MQ9NPB1 228 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 CYP39A1Q9NYL5 469 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 HACL1Q9UJ83 578 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 DNPEPQ9ULA0 475 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 SORCS3Q9UPU3 1222 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 SIK3Q9Y2K2 1263 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 ZC3H13Q5T200 1668 aaKnown RBP13.43□□□□□ -0.26
TNC-212ENST00000542877 FAM237AA0A1B0GTK4 181 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 VPS4BO75351 444 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 SLITRK3O94933 977 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 CPSF4O95639 269 aaKnown RBP13.43□□□□□ -0.26
TNC-212ENST00000542877 EIF2S1P05198 315 aaKnown RBP13.43□□□□□ -0.26
TNC-212ENST00000542877 PAEPP09466 180 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 GPC1P35052 558 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 BACE1P56817 501 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 PPIDQ08752 370 aaKnown RBP13.43□□□□□ -0.26
TNC-212ENST00000542877 FAAP100Q0VG06 881 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 NIPA1Q7RTP0 329 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 MIER2Q8N344 545 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 NUDT12Q9BQG2 462 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 NMRAL1Q9HBL8 299 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 INTS13Q9NVM9 706 aa13.43□□□□□ -0.26
TNC-212ENST00000542877 RBM22Q9NW64 420 aaKnown RBP eCLIP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms