RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 CNTNAP2Q9UHC6 1331 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 A0A087X1B8 175 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 SERPINB1P30740 379 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 SLC1A6P48664 564 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 RHOAP61586 193 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 LY6KQ17RY6 165 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 IQSEC1Q6DN90 963 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 INPP5DQ92835 1189 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 ANKRD27Q96NW4 1050 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 PAFAH2Q99487 392 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 USE1Q9NZ43 259 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 TAGLN3Q9UI15 199 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 ZNF711Q9Y462 761 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 DLG5Q8TDM6 1919 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 UMODL1Q5DID0 1318 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 CASTOR2A6NHX0 329 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 JCHAINP01591 159 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 NUP107P57740 925 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 POLR2LP62875 67 aaKnown RBP6.65□□□□□ -1.34
LSAMP-207ENST00000539563 PURAQ00577 322 aaKnown RBP6.65□□□□□ -1.34
LSAMP-207ENST00000539563 KCNMA1Q12791 1236 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 NBPF12Q5TAG4 269 aaPredicted RBP6.65□□□□□ -1.34
LSAMP-207ENST00000539563 OVOS1Q6IE37 1185 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 SLC27A1Q6PCB7 646 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 GPR141Q7Z602 305 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 MIB1Q86YT6 1006 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 TMEM86AQ8N2M4 240 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 KIF2BQ8N4N8 673 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 STARD8Q92502 1023 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 SYT15Q9BQS2 421 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 KLHL4Q9C0H6 718 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 TMEM134Q9H6X4 195 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 TSPAN16Q9UKR8 245 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 ZNF839A8K0R7 811 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 RAMP2O60895 175 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 PTPN3P26045 913 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 PPP2R1BP30154 601 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 CD151P48509 253 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 NTRK3Q16288 839 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 MFSD4BQ5TF39 518 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 SLC30A9Q6PML9 568 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 LUZP2Q86TE4 346 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 NT5DC3Q86UY8 548 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 CYP4Z2PQ8N1L4 340 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 MAGEC3Q8TD91 643 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 CAAP1Q9H8G2 361 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 NOD2Q9HC29 1040 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 CACNA2D2Q9NY47 1150 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 PADI4Q9UM07 663 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 DNAJC16Q9Y2G8 782 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 AP3M1Q9Y2T2 418 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 CAPN6Q9Y6Q1 641 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 ADGRB2O60241 1585 aa6.65□□□□□ -1.34
LSAMP-207ENST00000539563 SKAP2O75563 359 aaPredicted RBP6.65□□□□□ -1.35
LSAMP-207ENST00000539563 DDHD2O94830 711 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 ZNF286BP0CG31 522 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 CXCL8P10145 99 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 C4BPBP20851 252 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 NFIAQ12857 509 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 ORC1Q13415 861 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 REPS2Q8NFH8 660 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 MYCBPAPQ8TBZ2 947 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 SERAC1Q96JX3 654 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 SERPINB11Q96P15 392 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 TBCBQ99426 244 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 OSMRQ99650 979 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 PDCD2LQ9BRP1 358 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 PACSIN1Q9BY11 444 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 MRPL9Q9BYD2 267 aaKnown RBP6.65□□□□□ -1.35
LSAMP-207ENST00000539563 ZCWPW1Q9H0M4 648 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 DMAP1Q9NPF5 467 aaPredicted RBP6.65□□□□□ -1.35
LSAMP-207ENST00000539563 MIEF1Q9NQG6 463 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 RPS6KB2Q9UBS0 482 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 HAO1Q9UJM8 370 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.65□□□□□ -1.35
LSAMP-207ENST00000539563 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.65□□□□□ -1.35
LSAMP-207ENST00000539563 DUSP10Q9Y6W6 482 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 TFE3P19532 575 aaPredicted RBP6.65□□□□□ -1.35
LSAMP-207ENST00000539563 SEC24CP53992 1094 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 GCNT1Q02742 428 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 CCDC92Q53HC0 331 aaPredicted RBP6.65□□□□□ -1.35
LSAMP-207ENST00000539563 EXOSC4Q9NPD3 245 aaKnown RBP6.65□□□□□ -1.35
LSAMP-207ENST00000539563 OSGEPQ9NPF4 335 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 MAN1C1Q9NR34 630 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 LTN1O94822 1766 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.65□□□□□ -1.35
LSAMP-207ENST00000539563 NR5A2O00482 541 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 HMGCRP04035 888 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 CDK7P50613 346 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 ADIGQ0VDE8 80 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 FAM131BQ86XD5 332 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 KIAA0895Q8NCT3 520 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 DNAJB3Q8WWF6 145 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 ZNF606Q8WXB4 792 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 NMRAL1Q9HBL8 299 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 ENOPH1Q9UHY7 261 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 FMN2Q9NZ56 1722 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 IFT172Q9UG01 1749 aa6.65□□□□□ -1.35
LSAMP-207ENST00000539563 PDHXO00330 501 aa6.64□□□□□ -1.35
LSAMP-207ENST00000539563 HPGDP15428 266 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms