RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 SLC28A2O43868 658 aa6.02□□□□□ -1.45
CCDC7-209ENST00000539197 UGDHO60701 494 aa6.02□□□□□ -1.45
CCDC7-209ENST00000539197 U2AF1L5P0DN76 240 aaPredicted RBP6.02□□□□□ -1.45
CCDC7-209ENST00000539197 VPS41P49754 854 aa6.02□□□□□ -1.45
CCDC7-209ENST00000539197 PGGT1BP53609 377 aa6.02□□□□□ -1.45
CCDC7-209ENST00000539197 EPHB1P54762 984 aa6.02□□□□□ -1.45
CCDC7-209ENST00000539197 U2AF1Q01081 240 aaKnown RBP eCLIP6.02□□□□□ -1.45
CCDC7-209ENST00000539197 CNGA3Q16281 694 aa6.02□□□□□ -1.45
CCDC7-209ENST00000539197 AASDHQ4L235 1098 aaPredicted RBP6.02□□□□□ -1.45
CCDC7-209ENST00000539197 UEVLDQ8IX04 471 aa6.02□□□□□ -1.45
CCDC7-209ENST00000539197 APIPQ96GX9 242 aa6.02□□□□□ -1.45
CCDC7-209ENST00000539197 LRRC27Q9C0I9 530 aa6.02□□□□□ -1.45
CCDC7-209ENST00000539197 ABHD10Q9NUJ1 306 aa6.02□□□□□ -1.45
CCDC7-209ENST00000539197 CAPN11Q9UMQ6 739 aa6.02□□□□□ -1.45
CCDC7-209ENST00000539197 PCDHA12Q9UN75 941 aa6.02□□□□□ -1.45
CCDC7-209ENST00000539197 ICKQ9UPZ9 632 aa6.02□□□□□ -1.45
CCDC7-209ENST00000539197 TRBV5-3A0A0A0MS03 114 aa6.01□□□□□ -1.45
CCDC7-209ENST00000539197 PRYO14603 147 aa6.01□□□□□ -1.45
CCDC7-209ENST00000539197 NGFRP08138 427 aa6.01□□□□□ -1.45
CCDC7-209ENST00000539197 HOXB2P14652 356 aa6.01□□□□□ -1.45
CCDC7-209ENST00000539197 TFEBP19484 476 aa6.01□□□□□ -1.45
CCDC7-209ENST00000539197 TBXAS1P24557 533 aaPredicted RBP6.01□□□□□ -1.45
CCDC7-209ENST00000539197 CACNB3P54284 484 aa6.01□□□□□ -1.45
CCDC7-209ENST00000539197 PPATQ06203 517 aa6.01□□□□□ -1.45
CCDC7-209ENST00000539197 ARHGAP29Q52LW3 1261 aa6.01□□□□□ -1.45
CCDC7-209ENST00000539197 CXorf57Q6NSI4 855 aaKnown RBP6.01□□□□□ -1.45
CCDC7-209ENST00000539197 Q6ZTC4 211 aa6.01□□□□□ -1.45
CCDC7-209ENST00000539197 DCP1BQ8IZD4 617 aaKnown RBP6.01□□□□□ -1.45
CCDC7-209ENST00000539197 TMEM199Q8N511 208 aa6.01□□□□□ -1.45
CCDC7-209ENST00000539197 MBD3L2Q8NHZ7 208 aaPredicted RBP6.01□□□□□ -1.45
CCDC7-209ENST00000539197 SUN3Q8TAQ9 357 aa6.01□□□□□ -1.45
CCDC7-209ENST00000539197 FAM204AQ9H8W3 233 aa6.01□□□□□ -1.45
CCDC7-209ENST00000539197 C1orf112Q9NSG2 853 aa6.01□□□□□ -1.45
CCDC7-209ENST00000539197 MT-ND5P03915 603 aa6□□□□□ -1.45
CCDC7-209ENST00000539197 DGKQP52824 942 aa6□□□□□ -1.45
CCDC7-209ENST00000539197 HYAL1Q12794 435 aa6□□□□□ -1.45
CCDC7-209ENST00000539197 RRAGBQ5VZM2 374 aa6□□□□□ -1.45
CCDC7-209ENST00000539197 CCDC149Q6ZUS6 474 aa6□□□□□ -1.45
CCDC7-209ENST00000539197 ADGRF4Q8IZF3 695 aa6□□□□□ -1.45
CCDC7-209ENST00000539197 ASNSD1Q9NWL6 643 aa6□□□□□ -1.45
CCDC7-209ENST00000539197 CYSRT1A8MQ03 144 aa5.99□□□□□ -1.45
CCDC7-209ENST00000539197 TTC34A8MYJ7 566 aa5.99□□□□□ -1.45
CCDC7-209ENST00000539197 PRPF4O43172 522 aaKnown RBP eCLIP5.99□□□□□ -1.45
CCDC7-209ENST00000539197 ATG13O75143 517 aa5.99□□□□□ -1.45
CCDC7-209ENST00000539197 SCGB1D2O95969 90 aa5.99□□□□□ -1.45
CCDC7-209ENST00000539197 TNFRSF8P28908 595 aa5.99□□□□□ -1.45
CCDC7-209ENST00000539197 HOXA11P31270 313 aaPredicted RBP5.99□□□□□ -1.45
CCDC7-209ENST00000539197 ARRB2P32121 409 aa5.99□□□□□ -1.45
CCDC7-209ENST00000539197 PTGR1Q14914 329 aa5.99□□□□□ -1.45
CCDC7-209ENST00000539197 ACOX1Q15067 660 aa5.99□□□□□ -1.45
CCDC7-209ENST00000539197 INPP5JQ15735 1006 aaPredicted RBP5.99□□□□□ -1.45
CCDC7-209ENST00000539197 MINDY4Q4G0A6 757 aa5.99□□□□□ -1.45
CCDC7-209ENST00000539197 FAM102BQ5T8I3 360 aa5.99□□□□□ -1.45
CCDC7-209ENST00000539197 CELF1Q92879 486 aaKnown RBP5.99□□□□□ -1.45
CCDC7-209ENST00000539197 SNX22Q96L94 193 aa5.99□□□□□ -1.45
CCDC7-209ENST00000539197 FAM227BQ96M60 508 aa5.99□□□□□ -1.45
CCDC7-209ENST00000539197 RNF26Q9BY78 433 aaPredicted RBP5.99□□□□□ -1.45
CCDC7-209ENST00000539197 SLC25A32Q9H2D1 315 aa5.99□□□□□ -1.45
CCDC7-209ENST00000539197 SELENONQ9NZV5 590 aa5.99□□□□□ -1.45
CCDC7-209ENST00000539197 ZNF212Q9UDV6 495 aa5.99□□□□□ -1.45
CCDC7-209ENST00000539197 AGO2Q9UKV8 859 aaKnown RBP5.99□□□□□ -1.45
CCDC7-209ENST00000539197 A0A087WZ62 844 aa5.98□□□□□ -1.45
CCDC7-209ENST00000539197 CBFA2T3O75081 653 aa5.98□□□□□ -1.45
CCDC7-209ENST00000539197 SLC3A2P08195 630 aaKnown RBP5.98□□□□□ -1.45
CCDC7-209ENST00000539197 MT3P25713 68 aa5.98□□□□□ -1.45
CCDC7-209ENST00000539197 DUSP1P28562 367 aa5.98□□□□□ -1.45
CCDC7-209ENST00000539197 POLD2P49005 469 aa5.98□□□□□ -1.45
CCDC7-209ENST00000539197 P2RX3P56373 397 aa5.98□□□□□ -1.45
CCDC7-209ENST00000539197 POLD3Q15054 466 aaPredicted RBP5.98□□□□□ -1.45
CCDC7-209ENST00000539197 ASIC2Q16515 512 aa5.98□□□□□ -1.45
CCDC7-209ENST00000539197 KIAA0753Q2KHM9 967 aa5.98□□□□□ -1.45
CCDC7-209ENST00000539197 PDXDC1Q6P996 788 aa5.98□□□□□ -1.45
CCDC7-209ENST00000539197 TRAPPC11Q7Z392 1133 aa5.98□□□□□ -1.45
CCDC7-209ENST00000539197 RFX6Q8HWS3 928 aa5.98□□□□□ -1.45
CCDC7-209ENST00000539197 SDR16C5Q8N3Y7 309 aa5.98□□□□□ -1.45
CCDC7-209ENST00000539197 MEIS3Q99687 375 aa5.98□□□□□ -1.45
CCDC7-209ENST00000539197 SENP7Q9BQF6 1050 aa5.98□□□□□ -1.45
CCDC7-209ENST00000539197 ANAPC4Q9UJX5 808 aa5.98□□□□□ -1.45
CCDC7-209ENST00000539197 SPTLC2O15270 562 aa5.97□□□□□ -1.45
CCDC7-209ENST00000539197 KRT86O43790 486 aa5.97□□□□□ -1.45
CCDC7-209ENST00000539197 SOX2P48431 317 aa5.97□□□□□ -1.45
CCDC7-209ENST00000539197 KRT81Q14533 505 aa5.97□□□□□ -1.45
CCDC7-209ENST00000539197 AKAP1Q92667 903 aaKnown RBP eCLIP5.97□□□□□ -1.45
CCDC7-209ENST00000539197 EME1Q96AY2 570 aa5.97□□□□□ -1.45
CCDC7-209ENST00000539197 NTPCRQ9BSD7 190 aaKnown RBP5.97□□□□□ -1.45
CCDC7-209ENST00000539197 FZD3Q9NPG1 666 aa5.97□□□□□ -1.45
CCDC7-209ENST00000539197 THSD1Q9NS62 852 aa5.97□□□□□ -1.45
CCDC7-209ENST00000539197 ZNF335Q9H4Z2 1342 aaPredicted RBP5.97□□□□□ -1.45
CCDC7-209ENST00000539197 TPP1O14773 563 aa5.96□□□□□ -1.46
CCDC7-209ENST00000539197 ARP10275 920 aa5.96□□□□□ -1.46
CCDC7-209ENST00000539197 DRD1P21728 446 aa5.96□□□□□ -1.46
CCDC7-209ENST00000539197 PEX2P28328 305 aa5.96□□□□□ -1.46
CCDC7-209ENST00000539197 NDUFS1P28331 727 aa5.96□□□□□ -1.46
CCDC7-209ENST00000539197 ATICP31939 592 aa5.96□□□□□ -1.46
CCDC7-209ENST00000539197 KCNJ12Q14500 433 aa5.96□□□□□ -1.46
CCDC7-209ENST00000539197 ODR4Q5SWX8 454 aa5.96□□□□□ -1.46
CCDC7-209ENST00000539197 TTLL5Q6EMB2 1281 aa5.96□□□□□ -1.46
CCDC7-209ENST00000539197 FBXL14Q8N1E6 418 aa5.96□□□□□ -1.46
CCDC7-209ENST00000539197 ARL14EPQ8N8R7 260 aaPredicted RBP5.96□□□□□ -1.46
CCDC7-209ENST00000539197 KAT2BQ92831 832 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms