RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 RAMP2O60895 175 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 ATP9AO75110 1047 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 APOA4P06727 396 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 ENO3P13929 434 aaPredicted RBP16.64■□□□□ 0.25
USP42-207ENST00000521713 PTPN4P29074 926 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 SLC39A12Q504Y0 691 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 ZC3H12BQ5HYM0 836 aaKnown RBP16.64■□□□□ 0.25
USP42-207ENST00000521713 NLRP9Q7RTR0 991 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 OOSP2Q86WS3 158 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 ETNPPLQ8TBG4 499 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 PIK3R5Q8WYR1 880 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 EDEM1Q92611 657 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 PURBQ96QR8 312 aaKnown RBP16.64■□□□□ 0.25
USP42-207ENST00000521713 PACSIN1Q9BY11 444 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 STN1Q9H668 368 aaKnown RBP16.64■□□□□ 0.25
USP42-207ENST00000521713 USP20Q9Y2K6 914 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 SUPT3HB4E1H0 165 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 TOMM70O94826 608 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 SERPIND1P05546 499 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 RARGP13631 454 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 MLH1P40692 756 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 TRMT5Q32P41 509 aaKnown RBP16.64■□□□□ 0.25
USP42-207ENST00000521713 NOMO2Q5JPE7 1267 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 DENND5BQ6ZUT9 1274 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.64■□□□□ 0.25
USP42-207ENST00000521713 SLC9A9Q8IVB4 645 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 SNRNP27Q8WVK2 155 aaKnown RBP16.64■□□□□ 0.25
USP42-207ENST00000521713 ANKZF1Q9H8Y5 726 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 CLCA2Q9UQC9 943 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 C2CD2Q9Y426 696 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 MYOM1P52179 1685 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 CBX4O00257 560 aa16.63■□□□□ 0.25
USP42-207ENST00000521713 SOAT2O75908 522 aa16.63■□□□□ 0.25
USP42-207ENST00000521713 RPL9P32969 192 aaKnown RBP16.63■□□□□ 0.25
USP42-207ENST00000521713 CDH8P55286 799 aa16.63■□□□□ 0.25
USP42-207ENST00000521713 CAPSQ13938 189 aa16.63■□□□□ 0.25
USP42-207ENST00000521713 ARHGEF19Q8IW93 802 aa16.63■□□□□ 0.25
USP42-207ENST00000521713 STX19Q8N4C7 294 aa16.63■□□□□ 0.25
USP42-207ENST00000521713 ZNF483Q8TF39 744 aaPredicted RBP16.63■□□□□ 0.25
USP42-207ENST00000521713 SCN3BQ9NY72 215 aa16.63■□□□□ 0.25
USP42-207ENST00000521713 ETAA1Q9NY74 926 aa16.63■□□□□ 0.25
USP42-207ENST00000521713 SLC39A10Q9ULF5 831 aa16.63■□□□□ 0.25
USP42-207ENST00000521713 ZNF839A8K0R7 811 aa16.63■□□□□ 0.25
USP42-207ENST00000521713 TARSP26639 723 aaKnown RBP16.63■□□□□ 0.25
USP42-207ENST00000521713 SPDYAQ5MJ70 313 aa16.63■□□□□ 0.25
USP42-207ENST00000521713 MARC1Q5VT66 337 aa16.63■□□□□ 0.25
USP42-207ENST00000521713 TTC33Q6PID6 262 aaPredicted RBP16.63■□□□□ 0.25
USP42-207ENST00000521713 ACTRT1Q8TDG2 376 aa16.63■□□□□ 0.25
USP42-207ENST00000521713 ALG13Q9NP73 1137 aaKnown RBP16.63■□□□□ 0.25
USP42-207ENST00000521713 SLC6A3Q01959 620 aa16.63■□□□□ 0.25
USP42-207ENST00000521713 IRGCQ6NXR0 463 aa16.63■□□□□ 0.25
USP42-207ENST00000521713 UBE2OQ9C0C9 1292 aaKnown RBP16.63■□□□□ 0.25
USP42-207ENST00000521713 CDT1Q9H211 546 aa16.63■□□□□ 0.25
USP42-207ENST00000521713 GRK4P32298 578 aa16.63■□□□□ 0.25
USP42-207ENST00000521713 SWT1Q5T5J6 900 aaKnown RBP16.63■□□□□ 0.25
USP42-207ENST00000521713 FAXCQ5TGI0 409 aa16.63■□□□□ 0.25
USP42-207ENST00000521713 PATL1Q86TB9 770 aaKnown RBP16.63■□□□□ 0.25
USP42-207ENST00000521713 CAPNS2Q96L46 248 aa16.63■□□□□ 0.25
USP42-207ENST00000521713 GIMAP4Q9NUV9 329 aa16.63■□□□□ 0.25
USP42-207ENST00000521713 TBC1D13Q9NVG8 400 aa16.63■□□□□ 0.25
USP42-207ENST00000521713 KNDC1Q76NI1 1749 aa16.63■□□□□ 0.25
USP42-207ENST00000521713 CLPTM1O96005 669 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 CYP2F1P24903 491 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 PPM1AP35813 382 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 NFIL3Q16649 462 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 KBTBD12Q3ZCT8 623 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 TRIM48Q8IWZ4 208 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 AGR3Q8TD06 166 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 TFR2Q9UP52 801 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 GIT1Q9Y2X7 761 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 TIMM44O43615 452 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 EFCAB14O75071 495 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 VPS26AO75436 327 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 VCLP18206 1134 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 WASHC5Q12768 1159 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 CLEC4FQ8N1N0 589 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 SNX31Q8N9S9 440 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 MDM1Q8TC05 714 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 ACO2Q99798 780 aaKnown RBP16.62■□□□□ 0.25
USP42-207ENST00000521713 OSGEPQ9NPF4 335 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 CDYLQ9Y232 598 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 CAPN6Q9Y6Q1 641 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 SIGLEC1Q9BZZ2 1709 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 FARP2O94887 1054 aaPredicted RBP16.62■□□□□ 0.25
USP42-207ENST00000521713 SERPINF2P08697 491 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 PTPN1P18031 435 aaKnown RBP16.62■□□□□ 0.25
USP42-207ENST00000521713 HIST2H2ACQ16777 129 aaPredicted RBP16.62■□□□□ 0.25
USP42-207ENST00000521713 HIST2H2AA3Q6FI13 130 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 B4GALNT2Q8NHY0 566 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 TUBGCP3Q96CW5 907 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 MPP6Q9NZW5 540 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 LTFP02788 710 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 PRMT2P55345 433 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 TRIM69Q86WT6 500 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 FIBCD1Q8N539 461 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 CYGBQ8WWM9 190 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 POPDC2Q9HBU9 364 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 RBM22Q9NW64 420 aaKnown RBP eCLIP16.62■□□□□ 0.25
USP42-207ENST00000521713 WHRNQ9P202 907 aa16.62■□□□□ 0.25
USP42-207ENST00000521713 ABCC6O95255 1503 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms