RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 FAM83CQ9BQN1 747 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 EBF3Q9H4W6 596 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 OSGEPQ9NPF4 335 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 HPS4Q9NQG7 708 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 TDP1Q9NUW8 608 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 GMIPQ9P107 970 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 MAGEC2Q9UBF1 373 aaPredicted RBP10.06□□□□□ -0.8
TRIO-220ENST00000512979 CDH9Q9ULB4 789 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 RAB23Q9ULC3 237 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 PCDHA7Q9UN72 937 aa10.06□□□□□ -0.8
TRIO-220ENST00000512979 TRAV19A0A0A6YYK7 116 aa10.05□□□□□ -0.8
TRIO-220ENST00000512979 OTOL1A6NHN0 477 aaPredicted RBP10.05□□□□□ -0.8
TRIO-220ENST00000512979 UPK3BL1B0FP48 263 aa10.05□□□□□ -0.8
TRIO-220ENST00000512979 CHURC1-FNTBB4DL54 471 aa10.05□□□□□ -0.8
TRIO-220ENST00000512979 UPK3BL2E5RIL1 263 aa10.05□□□□□ -0.8
TRIO-220ENST00000512979 PPP1R12AO14974 1030 aaPredicted RBP10.05□□□□□ -0.8
TRIO-220ENST00000512979 PAPSS2O95340 614 aaPredicted RBP10.05□□□□□ -0.8
TRIO-220ENST00000512979 ALBP02768 609 aa10.05□□□□□ -0.8
TRIO-220ENST00000512979 PDGFRBP09619 1106 aa10.05□□□□□ -0.8
TRIO-220ENST00000512979 ARSAP15289 507 aa10.05□□□□□ -0.8
TRIO-220ENST00000512979 WARSP23381 471 aaKnown RBP10.05□□□□□ -0.8
TRIO-220ENST00000512979 MAGEA11P43364 429 aa10.05□□□□□ -0.8
TRIO-220ENST00000512979 AFMP43652 599 aa10.05□□□□□ -0.8
TRIO-220ENST00000512979 FNTBP49356 437 aa10.05□□□□□ -0.8
TRIO-220ENST00000512979 GYS2P54840 703 aa10.05□□□□□ -0.8
TRIO-220ENST00000512979 SNRPFP62306 86 aaKnown RBP10.05□□□□□ -0.8
TRIO-220ENST00000512979 CYP27A1Q02318 531 aa10.05□□□□□ -0.8
TRIO-220ENST00000512979 CYP24A1Q07973 514 aa10.05□□□□□ -0.8
TRIO-220ENST00000512979 GRSF1Q12849 480 aaKnown RBP eCLIP10.05□□□□□ -0.8
TRIO-220ENST00000512979 ZNF268Q14587 947 aaPredicted RBP10.05□□□□□ -0.8
TRIO-220ENST00000512979 PUM1Q14671 1186 aaKnown RBP eCLIP10.05□□□□□ -0.8
TRIO-220ENST00000512979 PSMD6Q15008 389 aa10.05□□□□□ -0.8
TRIO-220ENST00000512979 RSPO4Q2I0M5 234 aaPredicted RBP10.05□□□□□ -0.8
TRIO-220ENST00000512979 HEATR6Q6AI08 1181 aaKnown RBP10.05□□□□□ -0.8
TRIO-220ENST00000512979 DGLUCYQ7Z3D6 616 aa10.05□□□□□ -0.8
TRIO-220ENST00000512979 SYNPOQ8N3V7 929 aa10.05□□□□□ -0.8
TRIO-220ENST00000512979 TAB3Q8N5C8 712 aaPredicted RBP10.05□□□□□ -0.8
TRIO-220ENST00000512979 GPR161Q8N6U8 529 aaKnown RBP10.05□□□□□ -0.8
TRIO-220ENST00000512979 XXYLT1Q8NBI6 393 aa10.05□□□□□ -0.8
TRIO-220ENST00000512979 MYRFLQ96LU7 910 aa10.05□□□□□ -0.8
TRIO-220ENST00000512979 CGRRF1Q99675 332 aa10.05□□□□□ -0.8
TRIO-220ENST00000512979 SLC39A2Q9NP94 309 aa10.05□□□□□ -0.8
TRIO-220ENST00000512979 PCDH12Q9NPG4 1184 aa10.05□□□□□ -0.8
TRIO-220ENST00000512979 CRTAC1Q9NQ79 661 aa10.05□□□□□ -0.8
TRIO-220ENST00000512979 C2orf42Q9NWW7 574 aa10.05□□□□□ -0.8
TRIO-220ENST00000512979 USP18Q9UMW8 372 aa10.05□□□□□ -0.8
TRIO-220ENST00000512979 CEP250Q9BV73 2442 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 SLC22A31A6NKX4 558 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 K7ESF4 209 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 DNAJA2O60884 412 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 CST3P01034 146 aaPredicted RBP10.04□□□□□ -0.8
TRIO-220ENST00000512979 CKMP06732 381 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 BDNFP23560 247 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 ANXA13P27216 316 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 GNL1P36915 607 aaPredicted RBP10.04□□□□□ -0.8
TRIO-220ENST00000512979 GRIK1P39086 918 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 TNNC1P63316 161 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 AMPD2Q01433 879 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 SRSF5Q13243 272 aaKnown RBP10.04□□□□□ -0.8
TRIO-220ENST00000512979 TRPC3Q13507 836 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 CUL4BQ13620 913 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 PKP1Q13835 747 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 SIM2Q14190 667 aaPredicted RBP10.04□□□□□ -0.8
TRIO-220ENST00000512979 MTF1Q14872 753 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 PDGFRLQ15198 375 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 MAPRE1Q15691 268 aaKnown RBP10.04□□□□□ -0.8
TRIO-220ENST00000512979 BMT2Q1RMZ1 405 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 TMEM196Q5HYL7 178 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 MDH1BQ5I0G3 518 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 RESP18Q5W5W9 173 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 ATL3Q6DD88 541 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 LAIR1Q6GTX8 287 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 FSTL4Q6MZW2 842 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 VSTM1Q6UX27 236 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 LONP2Q86WA8 852 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 GRAMD1CQ8IYS0 662 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 CEP57L1Q8IYX8 460 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 ARL14EPQ8N8R7 260 aaPredicted RBP10.04□□□□□ -0.8
TRIO-220ENST00000512979 FSIP1Q8NA03 581 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 OR6B3Q8NGW1 331 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 CHFRQ96EP1 664 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 WDR89Q96FK6 387 aaPredicted RBP10.04□□□□□ -0.8
TRIO-220ENST00000512979 PCED1BQ96HM7 432 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 SPATA17Q96L03 361 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 SLC22A12Q96S37 553 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 CYP2S1Q96SQ9 504 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 MRPL45Q9BRJ2 306 aaKnown RBP10.04□□□□□ -0.8
TRIO-220ENST00000512979 SNX25Q9H3E2 840 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 DUS2Q9NX74 493 aaKnown RBP10.04□□□□□ -0.8
TRIO-220ENST00000512979 CFAP45Q9UL16 551 aa10.04□□□□□ -0.8
TRIO-220ENST00000512979 PVALEFA0A1B0GWK0 134 aa10.03□□□□□ -0.8
TRIO-220ENST00000512979 C2orf78A6NCI8 922 aa10.03□□□□□ -0.8
TRIO-220ENST00000512979 TRDMT1O14717 391 aaKnown RBP10.03□□□□□ -0.8
TRIO-220ENST00000512979 EXOC3O60645 756 aa10.03□□□□□ -0.8
TRIO-220ENST00000512979 TACC1O75410 805 aa10.03□□□□□ -0.8
TRIO-220ENST00000512979 EGFP01133 1207 aa10.03□□□□□ -0.8
TRIO-220ENST00000512979 NME1P15531 152 aaKnown RBP10.03□□□□□ -0.8
TRIO-220ENST00000512979 HOXC13P31276 330 aa10.03□□□□□ -0.8
TRIO-220ENST00000512979 IFNAR2P48551 515 aa10.03□□□□□ -0.8
TRIO-220ENST00000512979 KCNB1Q14721 858 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms