RNA–Protein interactions for RNA: ENST00000498569.5

NF1-217, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-217ENST00000498569 CNOT6LQ96LI5 555 aaKnown RBP5.54□□□□□ -1.52
NF1-217ENST00000498569 ALPK1Q96QP1 1244 aa5.54□□□□□ -1.52
NF1-217ENST00000498569 CITED4Q96RK1 184 aa5.54□□□□□ -1.52
NF1-217ENST00000498569 FAM129BQ96TA1 746 aa5.54□□□□□ -1.52
NF1-217ENST00000498569 TARS2Q9BW92 718 aaKnown RBP5.54□□□□□ -1.52
NF1-217ENST00000498569 SLC46A2Q9BY10 475 aa5.54□□□□□ -1.52
NF1-217ENST00000498569 FBRSL1Q9HCM7 1045 aaKnown RBP5.54□□□□□ -1.52
NF1-217ENST00000498569 POLD4Q9HCU8 107 aa5.54□□□□□ -1.52
NF1-217ENST00000498569 TRPC7Q9HCX4 862 aa5.54□□□□□ -1.52
NF1-217ENST00000498569 ATP13A1Q9HD20 1204 aa5.54□□□□□ -1.52
NF1-217ENST00000498569 KMT5AQ9NQR1 393 aa5.54□□□□□ -1.52
NF1-217ENST00000498569 GJB4Q9NTQ9 266 aa5.54□□□□□ -1.52
NF1-217ENST00000498569 TDP1Q9NUW8 608 aa5.54□□□□□ -1.52
NF1-217ENST00000498569 DUS2Q9NX74 493 aaKnown RBP5.54□□□□□ -1.52
NF1-217ENST00000498569 HSFX1Q9UBD0 423 aa5.54□□□□□ -1.52
NF1-217ENST00000498569 CCL26Q9Y258 94 aa5.54□□□□□ -1.52
NF1-217ENST00000498569 COL12A1Q99715 3063 aa5.54□□□□□ -1.52
NF1-217ENST00000498569 PTPRQQ9UMZ3 2332 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 PTPN13Q12923 2485 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 SPTA1P02549 2419 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 UPK3BL1B0FP48 263 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 UPK3BL2E5RIL1 263 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 EIF1AYO14602 144 aaKnown RBP5.53□□□□□ -1.52
NF1-217ENST00000498569 FANCGO15287 622 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 ICMTO60725 284 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 CXCL8P10145 99 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 ATF6P18850 670 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 TYMPP19971 482 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 HOXA5P20719 270 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 NME2P22392 152 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 RPA1P27694 616 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 MCM7P33993 719 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 NPTX2P47972 431 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 CDR1P51861 262 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 LINC00310P59036 64 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 SEMA3BQ13214 749 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 BYSLQ13895 437 aaKnown RBP5.53□□□□□ -1.52
NF1-217ENST00000498569 HNRNPDQ14103 355 aaKnown RBP5.53□□□□□ -1.52
NF1-217ENST00000498569 TRIM29Q14134 588 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 SEZ6Q53EL9 994 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 NAIF1Q69YI7 327 aaPredicted RBP5.53□□□□□ -1.52
NF1-217ENST00000498569 RABEPKQ7Z6M1 372 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 PIP4P1Q86T03 277 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 METTL23Q86XA0 190 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 TMEFF1Q8IYR6 380 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 CCDC33Q8N5R6 958 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 MDGA1Q8NFP4 955 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 CEP76Q8TAP6 659 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 MDM1Q8TC05 714 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 OSCP1Q8WVF1 389 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 HNRNPLLQ8WVV9 542 aaKnown RBP5.53□□□□□ -1.52
NF1-217ENST00000498569 RELTQ969Z4 430 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 BICD1Q96G01 975 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 HSPA12BQ96MM6 686 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 YTHDC1Q96MU7 727 aaKnown RBP5.53□□□□□ -1.52
NF1-217ENST00000498569 BHMT2Q9H2M3 363 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 ECT2Q9H8V3 914 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 PTPRHQ9HD43 1115 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 SEMA3GQ9NS98 782 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 MMP17Q9ULZ9 603 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 TBX20Q9UMR3 447 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 UBQLN1Q9UMX0 589 aaKnown RBP5.53□□□□□ -1.52
NF1-217ENST00000498569 MAGED2Q9UNF1 606 aaPredicted RBP5.53□□□□□ -1.52
NF1-217ENST00000498569 CABIN1Q9Y6J0 2220 aa5.53□□□□□ -1.52
NF1-217ENST00000498569 BOD1L1Q8NFC6 3051 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 KNL1Q8NG31 2342 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 TRAV19A0A0A6YYK7 116 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 FAM221BA6H8Z2 402 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 ETV2O00321 342 aaPredicted RBP5.52□□□□□ -1.53
NF1-217ENST00000498569 CLDN3O15551 220 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 AP5Z1O43299 807 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 TOM1L1O75674 476 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 LRIG2O94898 1065 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 REC8O95072 547 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 NFATC1O95644 943 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 SYPP08247 313 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 USP17L7P0C7H9 530 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 FTH1P19P0C7X4 201 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 CYP3A5P20815 502 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 PROZP22891 400 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 LRPAP1P30533 357 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 HOXD12P35452 270 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 CCT6AP40227 531 aaKnown RBP5.52□□□□□ -1.53
NF1-217ENST00000498569 PTGER3P43115 390 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 AARSP49588 968 aaKnown RBP eCLIP5.52□□□□□ -1.53
NF1-217ENST00000498569 FAM193AP78312 1265 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 IRX6P78412 446 aaPredicted RBP5.52□□□□□ -1.53
NF1-217ENST00000498569 TSPY1Q01534 308 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 RPL6Q02878 288 aaKnown RBP5.52□□□□□ -1.53
NF1-217ENST00000498569 SCRN1Q12765 414 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 ZNF268Q14587 947 aaPredicted RBP5.52□□□□□ -1.53
NF1-217ENST00000498569 KCNB1Q14721 858 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 TRIP6Q15654 476 aaKnown RBP5.52□□□□□ -1.53
NF1-217ENST00000498569 DUOXA1Q1HG43 343 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 SLC10A6Q3KNW5 377 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 SPDYCQ5MJ68 293 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 TXNDC8Q6A555 127 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 MON1AQ86VX9 555 aa5.52□□□□□ -1.53
NF1-217ENST00000498569 RASSF3Q86WH2 238 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms