RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 ERVPABLB-1P60509 514 aa7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 TLE1Q04724 770 aa7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 PPP2R3AQ06190 1150 aa7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 ILKQ13418 452 aa7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 LRP8Q14114 963 aa7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 LBRQ14739 615 aaKnown RBP7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 NR6A1Q15406 480 aa7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 CALCRLQ16602 461 aa7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 THEM5Q8N1Q8 247 aa7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 FSIP1Q8NA03 581 aa7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 SAP25Q8TEE9 199 aa7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 PCED1AQ9H1Q7 454 aa7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 C6orf106Q9H6K1 298 aaPredicted RBP7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 GJB4Q9NTQ9 266 aa7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 SMPD4Q9NXE4 827 aa7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 MYH10P35580 1976 aa7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 PCNX1Q96RV3 2341 aa7.6□□□□□ -1.19
PDLIM1-203ENST00000490391 ZNF840PA6NDX5 716 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 MPOP05164 745 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 HMGB1P09429 215 aaKnown RBP7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 RPA1P27694 616 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 OXTRP30559 389 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 TSPY1Q01534 308 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 SSRP1Q08945 709 aaKnown RBP7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 MAPK7Q13164 816 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 CLN3Q13286 438 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 ORC1Q13415 861 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 ENPP2Q13822 863 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 PDIA5Q14554 519 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 TEAD4Q15561 434 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 ECM1Q16610 540 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 CFAP221Q4G0U5 840 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 JADE1Q6IE81 842 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 SDE2Q6IQ49 451 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 ZPBP2Q6X784 338 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 CHSY3Q70JA7 882 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 METTL23Q86XA0 190 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 TMEM25Q86YD3 366 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 LRRN4Q8WUT4 740 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 TNFRSF25Q93038 417 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 OTUB2Q96DC9 234 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 TSPAN18Q96SJ8 248 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 DUSP9Q99956 384 aaKnown RBP7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 PYM1Q9BRP8 204 aaKnown RBP7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 TTLL2Q9BWV7 592 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 TRIM9Q9C026 710 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 TMEM60Q9H2L4 133 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 GPAMQ9HCL2 828 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 TBC1D14Q9P2M4 693 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 LRWD1Q9UFC0 647 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 PLXNA2O75051 1894 aa7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 NIPBLQ6KC79 2804 aaeCLIP7.59□□□□□ -1.19
PDLIM1-203ENST00000490391 KIF26BQ2KJY2 2108 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 TACC2O95359 2948 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 LAD1O00515 517 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 CLDN3O15551 220 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 DFNA5O60443 496 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 ARAFP10398 606 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 TAF6P49848 677 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 COPAP53621 1224 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 GABREP78334 506 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 CTBSQ01459 385 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 AAMPQ13685 434 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 KRT32Q14532 448 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 ARL13BQ3SXY8 428 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 PRAMEF14Q5SWL7 426 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 GRAMD4Q6IC98 578 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 TMPRSS6Q8IU80 811 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 EID2Q8N6I1 236 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 TMEM161BQ8NDZ6 487 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 SNX19Q92543 992 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 WBP2Q969T9 261 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 FUBP3Q96I24 572 aaKnown RBP eCLIP7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 VCPIP1Q96JH7 1222 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 DRC1Q96MC2 740 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 ELF4Q99607 663 aaPredicted RBP7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 ACBD6Q9BR61 282 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 NUP58Q9BVL2 599 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 BHMT2Q9H2M3 363 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 RPF1Q9H9Y2 349 aaKnown RBP7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 KMT5AQ9NQR1 393 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 SPHK2Q9NRA0 654 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 DNAJC17Q9NVM6 304 aaKnown RBP7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 TRPM5Q9NZQ8 1165 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 GTF3C4Q9UKN8 822 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 RBM19Q9Y4C8 960 aaKnown RBP7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 PCDHB6Q9Y5E3 794 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 STON1Q9Y6Q2 735 aa7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 COL27A1Q8IZC6 1860 aaPredicted RBP7.58□□□□□ -1.2
PDLIM1-203ENST00000490391 MED13Q9UHV7 2174 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 BLACEA4D250 179 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 SLC16A4O15374 487 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 EFSO43281 561 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 HCRTO43612 131 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 CACNG3O60359 315 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 NEMFO60524 1076 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 TSPAN3O60637 253 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 MT-CO3P00414 261 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 CISD3P0C7P0 127 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms