RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 MYO1AQ9UBC5 1043 aa4.46□□□□□ -1.7
HMGN1-218ENST00000490032 A0A1W2PPC4 97 aa4.45□□□□□ -1.7
HMGN1-218ENST00000490032 CCNT2O60583 730 aaKnown RBP4.45□□□□□ -1.7
HMGN1-218ENST00000490032 PQBP1O60828 265 aaKnown RBP4.45□□□□□ -1.7
HMGN1-218ENST00000490032 COQ9O75208 318 aa4.45□□□□□ -1.7
HMGN1-218ENST00000490032 TULP3O75386 442 aa4.45□□□□□ -1.7
HMGN1-218ENST00000490032 FGF2P09038 288 aa4.45□□□□□ -1.7
HMGN1-218ENST00000490032 PSG1P11464 419 aa4.45□□□□□ -1.7
HMGN1-218ENST00000490032 MYL4P12829 197 aa4.45□□□□□ -1.7
HMGN1-218ENST00000490032 MATN1P21941 496 aa4.45□□□□□ -1.7
HMGN1-218ENST00000490032 SCP2P22307 547 aa4.45□□□□□ -1.7
HMGN1-218ENST00000490032 HOXD12P35452 270 aa4.45□□□□□ -1.7
HMGN1-218ENST00000490032 FAXCQ5TGI0 409 aa4.45□□□□□ -1.7
HMGN1-218ENST00000490032 TLDC1Q6P9B6 456 aa4.45□□□□□ -1.7
HMGN1-218ENST00000490032 C9orf47Q6ZRZ4 202 aa4.45□□□□□ -1.7
HMGN1-218ENST00000490032 FAM57BQ71RH2 274 aa4.45□□□□□ -1.7
HMGN1-218ENST00000490032 PIM3Q86V86 326 aa4.45□□□□□ -1.7
HMGN1-218ENST00000490032 WDR75Q8IWA0 830 aaKnown RBP4.45□□□□□ -1.7
HMGN1-218ENST00000490032 MMP21Q8N119 569 aa4.45□□□□□ -1.7
HMGN1-218ENST00000490032 CLASRPQ8N2M8 674 aaKnown RBP4.45□□□□□ -1.7
HMGN1-218ENST00000490032 OVCA2Q8WZ82 227 aa4.45□□□□□ -1.7
HMGN1-218ENST00000490032 HEMK1Q9Y5R4 338 aaPredicted RBP4.45□□□□□ -1.7
HMGN1-218ENST00000490032 SLC22A23A1A5C7 686 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 POM121BA6NF01 834 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 PRYO14603 147 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 TLX3O43711 291 aaPredicted RBP4.44□□□□□ -1.7
HMGN1-218ENST00000490032 SLC5A1P13866 664 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 TNFRSF1BP20333 461 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 YY1P25490 414 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 CCKBRP32239 447 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 SLC12A2P55011 1212 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 GAB1Q13480 694 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 KLHDC7AQ5VTJ3 777 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 ZNF793Q6ZN11 406 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 BEND5Q7L4P6 421 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 SKAP1Q86WV1 359 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 CCDC28AQ8IWP9 274 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 PIGKQ92643 395 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 GJA10Q969M2 543 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 LRRC46Q96FV0 321 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 MARK4Q96L34 752 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 GDF15Q99988 308 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 SENP7Q9BQF6 1050 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 MAGEB5Q9BZ81 275 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 SEMA4BQ9NPR2 832 aaPredicted RBP4.44□□□□□ -1.7
HMGN1-218ENST00000490032 TMEM45AQ9NWC5 275 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 KLHL42Q9P2K6 505 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 PCDHB2Q9Y5E7 798 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 SPATA31A5Q5VU36 1347 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 SPATA31A7Q8IWB4 1347 aa4.44□□□□□ -1.7
HMGN1-218ENST00000490032 TTC34A8MYJ7 566 aa4.43□□□□□ -1.7
HMGN1-218ENST00000490032 KPNA5O15131 536 aa4.43□□□□□ -1.7
HMGN1-218ENST00000490032 DRD1P21728 446 aa4.43□□□□□ -1.7
HMGN1-218ENST00000490032 MMP8P22894 467 aa4.43□□□□□ -1.7
HMGN1-218ENST00000490032 NDUFS1P28331 727 aa4.43□□□□□ -1.7
HMGN1-218ENST00000490032 GABRB3P28472 473 aa4.43□□□□□ -1.7
HMGN1-218ENST00000490032 CCKARP32238 428 aa4.43□□□□□ -1.7
HMGN1-218ENST00000490032 IGHMBP2P38935 993 aaKnown RBP4.43□□□□□ -1.7
HMGN1-218ENST00000490032 SOX2P48431 317 aa4.43□□□□□ -1.7
HMGN1-218ENST00000490032 ZNF84P51523 738 aa4.43□□□□□ -1.7
HMGN1-218ENST00000490032 ATP1A4Q13733 1029 aa4.43□□□□□ -1.7
HMGN1-218ENST00000490032 SLC5A9Q2M3M2 681 aa4.43□□□□□ -1.7
HMGN1-218ENST00000490032 TMEM196Q5HYL7 178 aa4.43□□□□□ -1.7
HMGN1-218ENST00000490032 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.43□□□□□ -1.7
HMGN1-218ENST00000490032 COLCA1Q6ZS62 124 aa4.43□□□□□ -1.7
HMGN1-218ENST00000490032 RFX6Q8HWS3 928 aa4.43□□□□□ -1.7
HMGN1-218ENST00000490032 FMNL3Q8IVF7 1028 aa4.43□□□□□ -1.7
HMGN1-218ENST00000490032 AKAP1Q92667 903 aaKnown RBP eCLIP4.43□□□□□ -1.7
HMGN1-218ENST00000490032 CELF1Q92879 486 aaKnown RBP4.43□□□□□ -1.7
HMGN1-218ENST00000490032 ZNF845Q96IR2 970 aaPredicted RBP4.43□□□□□ -1.7
HMGN1-218ENST00000490032 SCNM1Q9BWG6 230 aa4.43□□□□□ -1.7
HMGN1-218ENST00000490032 METTL14Q9HCE5 456 aaKnown RBP4.43□□□□□ -1.7
HMGN1-218ENST00000490032 ASNSD1Q9NWL6 643 aa4.43□□□□□ -1.7
HMGN1-218ENST00000490032 VPS4AQ9UN37 437 aa4.43□□□□□ -1.7
HMGN1-218ENST00000490032 TRBV5-3A0A0A0MS03 114 aa4.42□□□□□ -1.7
HMGN1-218ENST00000490032 B4DGG1 531 aa4.42□□□□□ -1.7
HMGN1-218ENST00000490032 ZNF814B7Z6K7 855 aa4.42□□□□□ -1.7
HMGN1-218ENST00000490032 F8W810 466 aa4.42□□□□□ -1.7
HMGN1-218ENST00000490032 H3BNX3 289 aa4.42□□□□□ -1.7
HMGN1-218ENST00000490032 CRYABP02511 175 aaKnown RBP4.42□□□□□ -1.7
HMGN1-218ENST00000490032 ST6GAL1P15907 406 aa4.42□□□□□ -1.7
HMGN1-218ENST00000490032 TFEBP19484 476 aa4.42□□□□□ -1.7
HMGN1-218ENST00000490032 TKTP29401 623 aaKnown RBP4.42□□□□□ -1.7
HMGN1-218ENST00000490032 PRIM2P49643 509 aa4.42□□□□□ -1.7
HMGN1-218ENST00000490032 THBS3P49746 956 aa4.42□□□□□ -1.7
HMGN1-218ENST00000490032 VPS41P49754 854 aa4.42□□□□□ -1.7
HMGN1-218ENST00000490032 SEMA3BQ13214 749 aa4.42□□□□□ -1.7
HMGN1-218ENST00000490032 MTA1Q13330 715 aa4.42□□□□□ -1.7
HMGN1-218ENST00000490032 RAP1GAP2Q684P5 730 aa4.42□□□□□ -1.7
HMGN1-218ENST00000490032 ACSM6Q6P461 480 aa4.42□□□□□ -1.7
HMGN1-218ENST00000490032 KYAT3Q6YP21 454 aaKnown RBP4.42□□□□□ -1.7
HMGN1-218ENST00000490032 UEVLDQ8IX04 471 aa4.42□□□□□ -1.7
HMGN1-218ENST00000490032 CCDC150Q8NCX0 1101 aa4.42□□□□□ -1.7
HMGN1-218ENST00000490032 OR52L2PQ8NGH6 319 aa4.42□□□□□ -1.7
HMGN1-218ENST00000490032 GLMPQ8WWB7 406 aa4.42□□□□□ -1.7
HMGN1-218ENST00000490032 SNX27Q96L92 541 aa4.42□□□□□ -1.7
HMGN1-218ENST00000490032 NUDT22Q9BRQ3 303 aa4.42□□□□□ -1.7
HMGN1-218ENST00000490032 TUBB6Q9BUF5 446 aa4.42□□□□□ -1.7
HMGN1-218ENST00000490032 EIF2AQ9BY44 585 aaKnown RBP4.42□□□□□ -1.7
HMGN1-218ENST00000490032 FAM234AQ9H0X4 552 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms