RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 HOXA13P31271 388 aaPredicted RBP4.05□□□□□ -1.76
LRCH3-217ENST00000483442 PBX3P40426 434 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 NPEPPSP55786 919 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 BCAR1P56945 870 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 IGBP1P78318 339 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 MRPS6P82932 125 aaKnown RBP4.05□□□□□ -1.76
LRCH3-217ENST00000483442 ZNF543Q08ER8 600 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 SMC1AQ14683 1233 aaKnown RBP4.05□□□□□ -1.76
LRCH3-217ENST00000483442 PTPN14Q15678 1187 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 LPAL2Q16609 132 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 ZKSCAN2Q63HK3 967 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 CDCA2Q69YH5 1023 aaPredicted RBP4.05□□□□□ -1.76
LRCH3-217ENST00000483442 SDE2Q6IQ49 451 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 KIAA1841Q6NSI8 718 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 TAF2Q6P1X5 1199 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 LRRC55Q6ZSA7 311 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 ITPRIPQ8IWB1 547 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 FAM177A1Q8N128 213 aaPredicted RBP4.05□□□□□ -1.76
LRCH3-217ENST00000483442 BEND2Q8NDZ0 799 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 PPP1R14CQ8TAE6 165 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 AUTS2Q8WXX7 1259 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 APPBP2Q92624 585 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 SEC62Q99442 399 aaKnown RBP4.05□□□□□ -1.76
LRCH3-217ENST00000483442 ADAM2Q99965 735 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 PDCD2LQ9BRP1 358 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 LSM14BQ9BX40 385 aaKnown RBP4.05□□□□□ -1.76
LRCH3-217ENST00000483442 FTHL17Q9BXU8 183 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 TMX1Q9H3N1 280 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 CWH43Q9H720 699 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 SYNPO2LQ9H987 977 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.05□□□□□ -1.76
LRCH3-217ENST00000483442 OXSMQ9NWU1 459 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 SPG21Q9NZD8 308 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 DLGAP2Q9P1A6 1054 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 IGSF9Q9P2J2 1179 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 ZNF215Q9UL58 517 aaPredicted RBP4.05□□□□□ -1.76
LRCH3-217ENST00000483442 GINS2Q9Y248 185 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 LZTS1Q9Y250 596 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 MRPL11Q9Y3B7 192 aaKnown RBP4.05□□□□□ -1.76
LRCH3-217ENST00000483442 ATG2AQ2TAZ0 1938 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 RALGAPA2Q2PPJ7 1873 aa4.05□□□□□ -1.76
LRCH3-217ENST00000483442 DNAH14Q0VDD8 3507 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 ABCB11O95342 1321 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 WDR19Q8NEZ3 1342 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 LCTP09848 1927 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 MYH4Q9Y623 1939 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 CENPVL1A0A0U1RR11 272 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 DENND3A2RUS2 1198 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 M0QZ92 97 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 SLC30A4O14863 429 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 DHX16O60231 1041 aaKnown RBP4.04□□□□□ -1.76
LRCH3-217ENST00000483442 MGEA5O60502 916 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 SCAF4O95104 1147 aaKnown RBP4.04□□□□□ -1.76
LRCH3-217ENST00000483442 ABHD16AO95870 558 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 NUDT3O95989 172 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 JMJD7P0C870 316 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 MYBP10242 640 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 LAG3P18627 525 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 CASRP41180 1078 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 NOVP48745 357 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 PPFIA1Q13136 1202 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 NEDD9Q14511 834 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 PGM5Q15124 567 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 NONOQ15233 471 aaKnown RBP eCLIP4.04□□□□□ -1.76
LRCH3-217ENST00000483442 ZNF174Q15697 407 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 CDC37Q16543 378 aaPredicted RBP4.04□□□□□ -1.76
LRCH3-217ENST00000483442 LETM2Q2VYF4 491 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 FNDC3BQ53EP0 1204 aaKnown RBP4.04□□□□□ -1.76
LRCH3-217ENST00000483442 MARCH8Q5T0T0 291 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 DCLRE1AQ6PJP8 1040 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 TSSK4Q6SA08 328 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 CCDC149Q6ZUS6 474 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 SLC24A5Q71RS6 500 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 APBB1IPQ7Z5R6 666 aaPredicted RBP4.04□□□□□ -1.76
LRCH3-217ENST00000483442 GPR149Q86SP6 731 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 ADGRF4Q8IZF3 695 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 VPS52Q8N1B4 723 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 KBTBD3Q8NAB2 608 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 IL31RAQ8NI17 732 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 ZNF558Q96NG5 402 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 TEX101Q9BY14 249 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 OSBPL6Q9BZF3 934 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 PRDM13Q9H4Q3 707 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 ATP6V0A4Q9HBG4 840 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 ZSCAN32Q9NX65 697 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 TUBE1Q9UJT0 475 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 GMEB2Q9UKD1 530 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 PACSIN3Q9UKS6 424 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.04□□□□□ -1.76
LRCH3-217ENST00000483442 MTF2Q9Y483 593 aaPredicted RBP4.04□□□□□ -1.76
LRCH3-217ENST00000483442 PCDHA1Q9Y5I3 950 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 SPO11Q9Y5K1 396 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 SQORQ9Y6N5 450 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 TTC3P53804 2025 aa4.04□□□□□ -1.76
LRCH3-217ENST00000483442 FASNP49327 2511 aaKnown RBP4.03□□□□□ -1.76
LRCH3-217ENST00000483442 MYH7BA7E2Y1 1941 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 PLIN4Q96Q06 1357 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 GPR179Q6PRD1 2367 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 USP24Q9UPU5 2620 aa4.03□□□□□ -1.76
LRCH3-217ENST00000483442 OTOGLQ3ZCN5 2332 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms