RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 HMGA1P17096 107 aaKnown RBP12.59□□□□□ -0.39
PRPF39-203ENST00000477626 DSG1Q02413 1049 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 MFSD5Q6N075 450 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 DQX1Q8TE96 717 aaKnown RBP12.59□□□□□ -0.39
PRPF39-203ENST00000477626 IFT81Q8WYA0 676 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 COLEC11Q9BWP8 271 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 SEMA4AQ9H3S1 761 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 SYNCQ9H7C4 482 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 ABHD14A-ACY1A0A1B0GW23 586 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 PEX11BO96011 259 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 GLUD2P49448 558 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 CDH6P55285 790 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 SLC39A12Q504Y0 691 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 BSPRYQ5W0U4 402 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 HOOK3Q86VS8 718 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 TP53INP2Q8IXH6 220 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 KCTD6Q8NC69 237 aa12.59□□□□□ -0.39
PRPF39-203ENST00000477626 PRDM5Q9NQX1 630 aaPredicted RBP12.59□□□□□ -0.39
PRPF39-203ENST00000477626 RNF8O76064 485 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 KRT14P02533 472 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 PBX3P40426 434 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 NR2C2P49116 596 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 SULT1E1P49888 294 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 CMTR2Q8IYT2 770 aaKnown RBP12.58□□□□□ -0.4
PRPF39-203ENST00000477626 TTC13Q8NBP0 860 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 CASP10Q92851 521 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 MYRFLQ96LU7 910 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 CLUHO75153 1309 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 DENND4AQ7Z401 1863 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 NRG2O14511 850 aaPredicted RBP12.58□□□□□ -0.4
PRPF39-203ENST00000477626 PRPSAP2O60256 369 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 OAS2P29728 719 aaKnown RBP12.58□□□□□ -0.4
PRPF39-203ENST00000477626 CAV1Q03135 178 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 MORF4L2Q15014 288 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 RNF43Q68DV7 783 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 ARHGAP12Q8IWW6 846 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 CCDC105Q8IYK2 499 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 MZB1Q8WU39 189 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 FATE1Q969F0 183 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 NOL6Q9H6R4 1146 aaKnown RBP12.58□□□□□ -0.4
PRPF39-203ENST00000477626 SHOC2Q9UQ13 582 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 MRPL42Q9Y6G3 142 aaKnown RBP12.58□□□□□ -0.4
PRPF39-203ENST00000477626 NUP205Q92621 2012 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.58□□□□□ -0.4
PRPF39-203ENST00000477626 C5orf60A6NFR6 353 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 MFSD11O43934 449 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 FAM155BO75949 473 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 WASHC5Q12768 1159 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 SMARCB1Q12824 385 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 CDO1Q16878 200 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 P2RY11Q96G91 374 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 HAPLN3Q96S86 360 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 C5orf42Q9H799 3197 aa12.58□□□□□ -0.4
PRPF39-203ENST00000477626 ARHGEF37A1IGU5 675 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 TRIM66O15016 1216 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 BAIAP3O94812 1187 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 ABHD2P08910 425 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 OR1G1P47890 313 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 ATN1P54259 1190 aaPredicted RBP12.57□□□□□ -0.4
PRPF39-203ENST00000477626 YWHAGP61981 247 aaKnown RBP eCLIP12.57□□□□□ -0.4
PRPF39-203ENST00000477626 P3H1Q32P28 736 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 DCAF6Q58WW2 860 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 CCDC70Q6NSX1 233 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 METTL23Q86XA0 190 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 PAWRQ96IZ0 340 aaKnown RBP12.57□□□□□ -0.4
PRPF39-203ENST00000477626 C1orf74Q96LT6 269 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 DCDC2CA8MYV0 355 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 SEC24AO95486 1093 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 GPX6P59796 221 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 PPP2R5DQ14738 602 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 FNBP1LQ5T0N5 605 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 KAZNQ674X7 775 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 KCTD11Q693B1 232 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 C4orf50Q6ZRC1 276 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 RFX8Q6ZV50 586 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 FAM131BQ86XD5 332 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 CCDC50Q8IVM0 306 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 STKLD1Q8NE28 680 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 RNF139Q8WU17 664 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 TADA1Q96BN2 335 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 LRRC3Q9BY71 257 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 MCOLN1Q9GZU1 580 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 PLAAQ9Y263 795 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 RAD54BQ9Y620 910 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 PMS2P54278 862 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 SKOR1P84550 965 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 LMNB2Q03252 620 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 TMCO2Q7Z6W1 182 aaPredicted RBP12.57□□□□□ -0.4
PRPF39-203ENST00000477626 CAND1Q86VP6 1230 aaKnown RBP12.57□□□□□ -0.4
PRPF39-203ENST00000477626 CCHCR1Q8TD31 782 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 ZFRQ96KR1 1074 aaKnown RBP12.57□□□□□ -0.4
PRPF39-203ENST00000477626 FOXP3Q9BZS1 431 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 CDC42EP4Q9H3Q1 356 aaKnown RBP12.57□□□□□ -0.4
PRPF39-203ENST00000477626 RXFP1Q9HBX9 757 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.57□□□□□ -0.4
PRPF39-203ENST00000477626 PSD3Q9NYI0 1048 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 NINJ2Q9NZG7 142 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 SLC12A6Q9UHW9 1150 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 RASAL2Q9UJF2 1139 aa12.57□□□□□ -0.4
PRPF39-203ENST00000477626 ALOX15BO15296 676 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms