RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 WNK4Q96J92 1243 aa11.84□□□□□ -0.51
U2AF1-209ENST00000475639 CLPTM1LQ96KA5 538 aa11.84□□□□□ -0.51
U2AF1-209ENST00000475639 AGAP3Q96P47 875 aa11.84□□□□□ -0.51
U2AF1-209ENST00000475639 RBM38Q9H0Z9 239 aaKnown RBP11.84□□□□□ -0.51
U2AF1-209ENST00000475639 RAB6BQ9NRW1 208 aa11.84□□□□□ -0.51
U2AF1-209ENST00000475639 LSM7Q9UK45 103 aaKnown RBP11.84□□□□□ -0.51
U2AF1-209ENST00000475639 KLHL20Q9Y2M5 609 aa11.84□□□□□ -0.51
U2AF1-209ENST00000475639 ANKRD36CQ5JPF3 1778 aa11.83□□□□□ -0.51
U2AF1-209ENST00000475639 RGL2O15211 777 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 CAPN1P07384 714 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 CPA2P48052 419 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 CCT8P50990 548 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 AP3M2P53677 418 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 RPS7P62081 194 aaKnown RBP11.83□□□□□ -0.52
U2AF1-209ENST00000475639 TRIM32Q13049 653 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 ARHGEF7Q14155 803 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 DUOXA2Q1HG44 320 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 LRRC6Q86X45 466 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 SFR1Q86XK3 245 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 SLC13A5Q86YT5 568 aaPredicted RBP11.83□□□□□ -0.52
U2AF1-209ENST00000475639 METTL25Q8N6Q8 603 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 RIN3Q8TB24 985 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 SKA1Q96BD8 255 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 NARS2Q96I59 477 aaKnown RBP11.83□□□□□ -0.52
U2AF1-209ENST00000475639 FAM20AQ96MK3 541 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 PPP1R2P1Q96PQ5 205 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 C17orf80Q9BSJ5 609 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 DNAJC18Q9H819 358 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 FAIMQ9NVQ4 179 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 BARHL2Q9NY43 387 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 CDYLQ9Y232 598 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 SNRPAP09012 282 aaKnown RBP11.83□□□□□ -0.52
U2AF1-209ENST00000475639 RRM2P31350 389 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 SLC1A1P43005 524 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 MTTPP55157 894 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 CNTN1Q12860 1018 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 ARMC6Q6NXE6 501 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 C3orf67Q6ZVT6 689 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 FAM9CQ8IZT9 166 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 SYT11Q9BT88 431 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 AVENQ9NQS1 362 aaPredicted RBP11.83□□□□□ -0.52
U2AF1-209ENST00000475639 RAD18Q9NS91 495 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 CD274Q9NZQ7 290 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 UQCRBP14927 111 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 ITIH2P19823 946 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 IREB2P48200 963 aaKnown RBP11.83□□□□□ -0.52
U2AF1-209ENST00000475639 CSE1LP55060 971 aaKnown RBP11.83□□□□□ -0.52
U2AF1-209ENST00000475639 ACTR3P61158 418 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 SLC25A24Q6NUK1 477 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 TMEM53Q6P2H8 277 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 MACC1Q6ZN28 852 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 MOSPD2Q8NHP6 518 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 VPS33BQ9H267 617 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 PIGUQ9H490 435 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 TUFT1Q9NNX1 390 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 PSMC3IPQ9P2W1 217 aaPredicted RBP11.83□□□□□ -0.52
U2AF1-209ENST00000475639 E9PBE3 544 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 VCLP18206 1134 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 PSMA4P25789 261 aaKnown RBP11.83□□□□□ -0.52
U2AF1-209ENST00000475639 SOX11P35716 441 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 IL12RB1P42701 662 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 PKN2Q16513 984 aaKnown RBP11.83□□□□□ -0.52
U2AF1-209ENST00000475639 PHKG1Q16816 387 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 UGT2A3Q6UWM9 527 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 LAYNQ6UX15 382 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 LRRC8DQ7L1W4 858 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 CPNE8Q86YQ8 564 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 OR8H2Q8N162 312 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 EXD1Q8NHP7 514 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 STK33Q9BYT3 514 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 SERHL2Q9H4I8 314 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 SERHLQ9NQF3 203 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 DNAJB4Q9UDY4 337 aa11.83□□□□□ -0.52
U2AF1-209ENST00000475639 RGPD5Q99666 1765 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 HTR3EA5X5Y0 456 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.82□□□□□ -0.52
U2AF1-209ENST00000475639 BBOX1O75936 387 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 KRT6BP04259 564 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 KRT6CP48668 564 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 SERPINB8P50452 374 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 SLC18A1P54219 525 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 AQP4P55087 323 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 AP1S2P56377 157 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 ZNF200P98182 395 aaPredicted RBP11.82□□□□□ -0.52
U2AF1-209ENST00000475639 UBE2SQ16763 222 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 KNOP1Q1ED39 458 aaKnown RBP11.82□□□□□ -0.52
U2AF1-209ENST00000475639 OLFML1Q6UWY5 402 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 TSHZ1Q6ZSZ6 1077 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 BNIPLQ7Z465 357 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 PGBD3Q8N328 593 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 ZCCHC7Q8N3Z6 543 aaKnown RBP11.82□□□□□ -0.52
U2AF1-209ENST00000475639 C12orf50Q8NA57 414 aaPredicted RBP11.82□□□□□ -0.52
U2AF1-209ENST00000475639 ZFP28Q8NHY6 868 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 RMDN3Q96TC7 470 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 CHORDC1Q9UHD1 332 aaPredicted RBP11.82□□□□□ -0.52
U2AF1-209ENST00000475639 R3HDM2Q9Y2K5 976 aaKnown RBP11.82□□□□□ -0.52
U2AF1-209ENST00000475639 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.82□□□□□ -0.52
U2AF1-209ENST00000475639 SPACA6W5XKT8 324 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 DFFAO00273 331 aa11.82□□□□□ -0.52
U2AF1-209ENST00000475639 MAGEC1O60732 1142 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms