RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 MATKP42679 507 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 SLC5A3P53794 718 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 ROR2Q01974 943 aaKnown RBP15.38■□□□□ 0.05
LMNA-213ENST00000473598 IFT88Q13099 833 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 SNX1Q13596 522 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 DDR2Q16832 855 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 HADHQ16836 314 aaKnown RBP15.38■□□□□ 0.05
LMNA-213ENST00000473598 SH3PXD2AQ5TCZ1 1133 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 SEL1L2Q5TEA6 688 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 AADACL2Q6P093 401 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 HFE2Q6ZVN8 426 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 BHLHA9Q7RTU4 235 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 POLNQ7Z5Q5 900 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 NLRP14Q86W24 1093 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 KIRREL3Q8IZU9 778 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 DEFB106AQ8N104 65 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 TTC9BQ8N6N2 239 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 PLVAPQ9BX97 442 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 ZNF576Q9H609 170 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 POPDC2Q9HBU9 364 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 EPB41L5Q9HCM4 733 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 C15orf41Q9Y2V0 281 aa15.38■□□□□ 0.05
LMNA-213ENST00000473598 MYO9BQ13459 2157 aa15.37■□□□□ 0.05
LMNA-213ENST00000473598 EPOPA6NHQ4 379 aa15.37■□□□□ 0.05
LMNA-213ENST00000473598 MIPP30301 263 aa15.37■□□□□ 0.05
LMNA-213ENST00000473598 NOS2P35228 1153 aa15.37■□□□□ 0.05
LMNA-213ENST00000473598 GJC1P36383 396 aa15.37■□□□□ 0.05
LMNA-213ENST00000473598 GPR15P49685 360 aa15.37■□□□□ 0.05
LMNA-213ENST00000473598 ATP11AP98196 1134 aa15.37■□□□□ 0.05
LMNA-213ENST00000473598 GUCY2DQ02846 1103 aa15.37■□□□□ 0.05
LMNA-213ENST00000473598 CDO1Q16878 200 aa15.37■□□□□ 0.05
LMNA-213ENST00000473598 KLHL7Q8IXQ5 586 aa15.37■□□□□ 0.05
LMNA-213ENST00000473598 GPR65Q8IYL9 337 aa15.37■□□□□ 0.05
LMNA-213ENST00000473598 SCAMP5Q8TAC9 235 aa15.37■□□□□ 0.05
LMNA-213ENST00000473598 NSMCE1Q8WV22 266 aa15.37■□□□□ 0.05
LMNA-213ENST00000473598 ZFAND2BQ8WV99 257 aa15.37■□□□□ 0.05
LMNA-213ENST00000473598 CENPIQ92674 756 aaPredicted RBP15.37■□□□□ 0.05
LMNA-213ENST00000473598 SLC2A13Q96QE2 648 aa15.37■□□□□ 0.05
LMNA-213ENST00000473598 RUFY1Q96T51 708 aa15.37■□□□□ 0.05
LMNA-213ENST00000473598 AP1M1Q9BXS5 423 aa15.37■□□□□ 0.05
LMNA-213ENST00000473598 CRISPLD1Q9H336 500 aa15.37■□□□□ 0.05
LMNA-213ENST00000473598 SLC27A5Q9Y2P5 690 aa15.37■□□□□ 0.05
LMNA-213ENST00000473598 ZSCAN5CA6NGD5 496 aaPredicted RBP15.36■□□□□ 0.05
LMNA-213ENST00000473598 KRIT1O00522 736 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 FGGP02679 453 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 LTFP02788 710 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 KRT7P08729 469 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 HAPLN1P10915 354 aaPredicted RBP15.36■□□□□ 0.05
LMNA-213ENST00000473598 IL1R2P27930 398 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 DUSP4Q13115 394 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 RIPK1Q13546 671 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 CLUL1Q15846 466 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 ATP13A4Q4VNC1 1196 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 CCDC38Q502W7 563 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 DCAF6Q58WW2 860 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 TXNRD3NBQ6F5E7 133 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 SND1Q7KZF4 910 aaKnown RBP eCLIP15.36■□□□□ 0.051e-8■■□□□ 12.8
LMNA-213ENST00000473598 SDCCAG8Q86SQ7 713 aaPredicted RBP15.36■□□□□ 0.05
LMNA-213ENST00000473598 NUP93Q8N1F7 819 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 EXD1Q8NHP7 514 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 FAM172AQ8WUF8 416 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 ARNTL2Q8WYA1 636 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 EZH1Q92800 747 aaPredicted RBP15.36■□□□□ 0.05
LMNA-213ENST00000473598 CAVIN3Q969G5 261 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 CCT8L2Q96SF2 557 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 NGRNQ9NPE2 291 aaKnown RBP15.36■□□□□ 0.05
LMNA-213ENST00000473598 HAUS2Q9NVX0 235 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 DDX56Q9NY93 547 aaKnown RBP15.36■□□□□ 0.05
LMNA-213ENST00000473598 USP18Q9UMW8 372 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 RFXAPO00287 272 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 ATP6V1G2O95670 118 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 TRUB2O95900 331 aaKnown RBP15.36■□□□□ 0.05
LMNA-213ENST00000473598 FYNP06241 537 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 TFE3P19532 575 aaPredicted RBP15.36■□□□□ 0.05
LMNA-213ENST00000473598 CARSP49589 748 aaKnown RBP15.36■□□□□ 0.05
LMNA-213ENST00000473598 SLC25A52Q3SY17 297 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 MGAT5BQ3V5L5 792 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 RAB6CQ53S08 254 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 TTMPQ5BVD1 217 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 ANKRD20A8PQ5CZ79 823 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 SDHAF4Q5VUM1 108 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 SPATA21Q7Z572 469 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 ZNF461Q8TAF7 563 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 NT5C3BQ969T7 300 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 SEPT5Q99719 369 aaPredicted RBP15.36■□□□□ 0.05
LMNA-213ENST00000473598 RAB6CQ9H0N0 254 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 ZBP1Q9H171 429 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 ZWILCHQ9H900 591 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 MRPL17Q9NRX2 175 aaKnown RBP15.36■□□□□ 0.05
LMNA-213ENST00000473598 PCSK1NQ9UHG2 260 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 STAP1Q9ULZ2 295 aa15.36■□□□□ 0.05
LMNA-213ENST00000473598 PRUNE2Q8WUY3 3088 aa15.35■□□□□ 0.05
LMNA-213ENST00000473598 ESYT3A0FGR9 886 aa15.35■□□□□ 0.05
LMNA-213ENST00000473598 CAPN9O14815 690 aa15.35■□□□□ 0.05
LMNA-213ENST00000473598 ABLIM3O94929 683 aa15.35■□□□□ 0.05
LMNA-213ENST00000473598 HDAC4P56524 1084 aa15.35■□□□□ 0.05
LMNA-213ENST00000473598 IFRD2Q12894 506 aaPredicted RBP15.35■□□□□ 0.05
LMNA-213ENST00000473598 NNTQ13423 1086 aa15.35■□□□□ 0.05
LMNA-213ENST00000473598 LAMB3Q13751 1172 aa15.35■□□□□ 0.05
LMNA-213ENST00000473598 SYPL2Q5VXT5 272 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms