RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 ADAMTS20P59510 1910 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 PLXND1Q9Y4D7 1925 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 A0A1B0GTW7 788 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 A0A1B0GVL5 298 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 FAM47DPA6NHR8 397 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 UPK3BL1B0FP48 263 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 UPK3BL2E5RIL1 263 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 H0Y626 953 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 CBX4O00257 560 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 TULP2O00295 520 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 BCAT2O15382 392 aaPredicted RBP10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 FSBPO95073 299 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 TRIM16O95361 564 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 CALCAP01258 141 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 ACADMP11310 421 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 PDIA4P13667 645 aaKnown RBP10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 P4HA1P13674 534 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 ACSL1P33121 698 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 HOXD12P35452 270 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 MATKP42679 507 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 KIF11P52732 1056 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 COPAP53621 1224 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 ARID5AQ03989 594 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 PKP1Q13835 747 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 KIF19Q2TAC6 998 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 KCNT1Q5JUK3 1230 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 CCNI2Q6ZMN8 369 aaPredicted RBP10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 RSRC2Q7L4I2 434 aaKnown RBP10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 C12orf56Q8IXR9 622 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 CEP57L1Q8IYX8 460 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 EDEM1Q92611 657 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 PRCCQ92733 491 aaPredicted RBP10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 SEMA4DQ92854 862 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 DCBLD2Q96PD2 775 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 HNRNPABQ99729 332 aaKnown RBP10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 KCTD10Q9H3F6 313 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 CUEDC2Q9H467 287 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 FAM124BQ9H5Z6 455 aaPredicted RBP10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 VRTNQ9H8Y1 702 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 DMAC2Q9NW81 257 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 COMMD8Q9NX08 183 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 THAP10Q9P2Z0 257 aaPredicted RBP10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 SFMBT1Q9UHJ3 866 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 PLXNB3Q9ULL4 1909 aa10.6□□□□□ -0.71
SCAMP3-205ENST00000472397 DSPP15924 2871 aaKnown RBP10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 GOLGA6L7A0A1B0GV03 622 aa10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 METTL12A8MUP2 240 aa10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 CBFA2T3O75081 653 aa10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 YEATS4O95619 227 aa10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 ASS1P00966 412 aaKnown RBP10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 PRB1P04280 392 aa10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 RALAP11233 206 aa10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 SGSHP51688 502 aa10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 VAMP7P51809 220 aa10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 YWHAGP61981 247 aaKnown RBP eCLIP10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 DNM1Q05193 864 aaKnown RBP10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 FNDC3BQ53EP0 1204 aaKnown RBP10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 SERPINA13PQ6UXR4 307 aa10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 RABEPKQ7Z6M1 372 aa10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 UNC93AQ86WB7 457 aa10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 UBA3Q8TBC4 463 aa10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 FOXJ1Q92949 421 aa10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 TATDN2Q93075 761 aa10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 NT5C1AQ9BXI3 368 aa10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 ELOVL2Q9NXB9 296 aa10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 MARCH2Q9P0N8 246 aa10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 USP36Q9P275 1121 aaKnown RBP10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 SUSD2Q9UGT4 822 aa10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 APOBEC2Q9Y235 224 aaKnown RBP10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 WDFY3Q8IZQ1 3526 aa10.59□□□□□ -0.71
SCAMP3-205ENST00000472397 NUMA1Q14980 2115 aa10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 DMXL2Q8TDJ6 3036 aa10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 PVALEFA0A1B0GWK0 134 aa10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 FAM221BA6H8Z2 402 aa10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 TRABD2BA6NFA1 517 aa10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 H0Y8X5 98 aa10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 K7ELQ4 463 aaPredicted RBP10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 MSI1O43347 362 aaKnown RBP10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 ACTN4O43707 911 aaKnown RBP10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 PENKP01210 267 aaPredicted RBP10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 RPN1P04843 607 aaKnown RBP10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 AP3M2P53677 418 aa10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 SNRPFP62306 86 aaKnown RBP10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 CLDN10P78369 228 aa10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 RESP18Q5W5W9 173 aa10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 CNNM4Q6P4Q7 775 aa10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 DHRS13Q6UX07 377 aa10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 CHST9Q7L1S5 443 aa10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 ANKS1BQ7Z6G8 1248 aa10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 PIGZQ86VD9 579 aa10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 GATAD2AQ86YP4 633 aa10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 ZC3H3Q8IXZ2 948 aaKnown RBP10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 GANCQ8TET4 914 aa10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 UCMAQ8WVF2 138 aa10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 DNASE2BQ8WZ79 361 aa10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 PIWIL1Q96J94 861 aaKnown RBP10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 DUSP16Q9BY84 665 aa10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 ULBP1Q9BZM6 244 aa10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 TOR4AQ9NXH8 423 aa10.58□□□□□ -0.72
SCAMP3-205ENST00000472397 STIM2Q9P246 746 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms