RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 PMM1Q92871 262 aa4.56□□□□□ -1.68
BRCA2-202ENST00000470094 MAP4K1Q92918 833 aa4.56□□□□□ -1.68
BRCA2-202ENST00000470094 CUL5Q93034 780 aa4.56□□□□□ -1.68
BRCA2-202ENST00000470094 C18orf8Q96DM3 657 aa4.56□□□□□ -1.68
BRCA2-202ENST00000470094 RNF26Q9BY78 433 aaPredicted RBP4.56□□□□□ -1.68
BRCA2-202ENST00000470094 PRSS22Q9GZN4 317 aa4.56□□□□□ -1.68
BRCA2-202ENST00000470094 NUAK2Q9H093 628 aa4.56□□□□□ -1.68
BRCA2-202ENST00000470094 RXFP3Q9NSD7 469 aa4.56□□□□□ -1.68
BRCA2-202ENST00000470094 PI4KBQ9UBF8 816 aa4.56□□□□□ -1.68
BRCA2-202ENST00000470094 ZNF70Q9UC06 446 aaPredicted RBP4.56□□□□□ -1.68
BRCA2-202ENST00000470094 CDC23Q9UJX2 597 aa4.56□□□□□ -1.68
BRCA2-202ENST00000470094 MAGED2Q9UNF1 606 aaPredicted RBP4.56□□□□□ -1.68
BRCA2-202ENST00000470094 DTNAQ9Y4J8 743 aa4.56□□□□□ -1.68
BRCA2-202ENST00000470094 HEMK1Q9Y5R4 338 aaPredicted RBP4.56□□□□□ -1.68
BRCA2-202ENST00000470094 PIP5K1BO14986 540 aa4.55□□□□□ -1.68
BRCA2-202ENST00000470094 CTIFO43310 598 aaKnown RBP4.55□□□□□ -1.68
BRCA2-202ENST00000470094 BCAR3O75815 825 aa4.55□□□□□ -1.68
BRCA2-202ENST00000470094 ATP5F1P24539 256 aaPredicted RBP4.55□□□□□ -1.68
BRCA2-202ENST00000470094 ZNF81P51508 661 aa4.55□□□□□ -1.68
BRCA2-202ENST00000470094 SSBP2P81877 361 aaPredicted RBP4.55□□□□□ -1.68
BRCA2-202ENST00000470094 CBFBQ13951 182 aa4.55□□□□□ -1.68
BRCA2-202ENST00000470094 UBE4AQ14139 1066 aa4.55□□□□□ -1.68
BRCA2-202ENST00000470094 SEC23BQ15437 767 aa4.55□□□□□ -1.68
BRCA2-202ENST00000470094 PIK3AP1Q6ZUJ8 805 aa4.55□□□□□ -1.68
BRCA2-202ENST00000470094 MORC1Q86VD1 984 aa4.55□□□□□ -1.68
BRCA2-202ENST00000470094 OR52L2PQ8NGH6 319 aa4.55□□□□□ -1.68
BRCA2-202ENST00000470094 PRSS3P2Q8NHM4 247 aa4.55□□□□□ -1.68
BRCA2-202ENST00000470094 AKAP1Q92667 903 aaKnown RBP eCLIP4.55□□□□□ -1.68
BRCA2-202ENST00000470094 RPL36ALQ969Q0 106 aaKnown RBP4.55□□□□□ -1.68
BRCA2-202ENST00000470094 TMEM41AQ96HV5 264 aa4.55□□□□□ -1.68
BRCA2-202ENST00000470094 EPS8L2Q9H6S3 715 aa4.55□□□□□ -1.68
BRCA2-202ENST00000470094 FBXO28Q9NVF7 368 aa4.55□□□□□ -1.68
BRCA2-202ENST00000470094 SEMA5BQ9P283 1151 aa4.55□□□□□ -1.68
BRCA2-202ENST00000470094 LRCH1Q9Y2L9 728 aa4.55□□□□□ -1.68
BRCA2-202ENST00000470094 CCDC187A0A096LP49 1063 aa4.54□□□□□ -1.68
BRCA2-202ENST00000470094 PCDH17O14917 1159 aa4.54□□□□□ -1.68
BRCA2-202ENST00000470094 NPC1O15118 1278 aa4.54□□□□□ -1.68
BRCA2-202ENST00000470094 NTSR2O95665 410 aa4.54□□□□□ -1.68
BRCA2-202ENST00000470094 ITGA5P08648 1049 aa4.54□□□□□ -1.68
BRCA2-202ENST00000470094 SETSIPP0DME0 302 aa4.54□□□□□ -1.68
BRCA2-202ENST00000470094 ALADP13716 330 aa4.54□□□□□ -1.68
BRCA2-202ENST00000470094 MMP13P45452 471 aa4.54□□□□□ -1.68
BRCA2-202ENST00000470094 VPS41P49754 854 aa4.54□□□□□ -1.68
BRCA2-202ENST00000470094 ALDH18A1P54886 795 aaKnown RBP4.54□□□□□ -1.68
BRCA2-202ENST00000470094 ELF2Q15723 593 aa4.54□□□□□ -1.68
BRCA2-202ENST00000470094 FAM110CQ1W6H9 321 aa4.54□□□□□ -1.68
BRCA2-202ENST00000470094 ACSM6Q6P461 480 aa4.54□□□□□ -1.68
BRCA2-202ENST00000470094 TOGARAM2Q6ZUX3 1019 aa4.54□□□□□ -1.68
BRCA2-202ENST00000470094 GATAD2AQ86YP4 633 aa4.54□□□□□ -1.68
BRCA2-202ENST00000470094 DENND1AQ8TEH3 1009 aa4.54□□□□□ -1.68
BRCA2-202ENST00000470094 SMG7Q92540 1137 aaKnown RBP4.54□□□□□ -1.68
BRCA2-202ENST00000470094 PRPF18Q99633 342 aaKnown RBP4.54□□□□□ -1.68
BRCA2-202ENST00000470094 TTLL2Q9BWV7 592 aa4.54□□□□□ -1.68
BRCA2-202ENST00000470094 FSCN3Q9NQT6 498 aa4.54□□□□□ -1.68
BRCA2-202ENST00000470094 BTBD3Q9Y2F9 522 aa4.54□□□□□ -1.68
BRCA2-202ENST00000470094 UBE2J1Q9Y385 318 aaPredicted RBP4.54□□□□□ -1.68
BRCA2-202ENST00000470094 SIRT4Q9Y6E7 314 aaPredicted RBP4.54□□□□□ -1.68
BRCA2-202ENST00000470094 E5RJQ4 531 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 FCHO1O14526 889 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 INPPL1O15357 1258 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 FFAR2O15552 330 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 DHHO43323 396 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 USP12O75317 370 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 TAF5LO75529 589 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 ANXA6P08133 673 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 NPPBP16860 134 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 SFPQP23246 707 aaKnown RBP eCLIP4.53□□□□□ -1.68
BRCA2-202ENST00000470094 LMO1P25800 156 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 NDUFS1P28331 727 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 SERPINB3P29508 390 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 HTR3AP46098 478 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 YPEL5P62699 121 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 KLF9Q13886 244 aaPredicted RBP4.53□□□□□ -1.68
BRCA2-202ENST00000470094 TRIP6Q15654 476 aaKnown RBP4.53□□□□□ -1.68
BRCA2-202ENST00000470094 MSANTD2Q6P1R3 559 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 ZNF527Q8NB42 609 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.53□□□□□ -1.68
BRCA2-202ENST00000470094 WDR60Q8WVS4 1066 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 GLMPQ8WWB7 406 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 FAR2Q96K12 515 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 ZNF778Q96MU6 729 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 SENP7Q9BQF6 1050 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 POLR3GLQ9BT43 218 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 C1QTNF7Q9BXJ2 289 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 CDCP1Q9H5V8 836 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 ASNSD1Q9NWL6 643 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 IGSF9Q9P2J2 1179 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 RNF7Q9UBF6 113 aa4.53□□□□□ -1.68
BRCA2-202ENST00000470094 COL3A1P02461 1466 aaPredicted RBP4.53□□□□□ -1.68
BRCA2-202ENST00000470094 ARID4BQ4LE39 1312 aaPredicted RBP4.52□□□□□ -1.69
BRCA2-202ENST00000470094 GOLGA6L3A6NEY3 463 aa4.52□□□□□ -1.69
BRCA2-202ENST00000470094 INO80B-WBP1J3KQ70 363 aa4.52□□□□□ -1.69
BRCA2-202ENST00000470094 PRYO14603 147 aa4.52□□□□□ -1.69
BRCA2-202ENST00000470094 RRHO14718 337 aa4.52□□□□□ -1.69
BRCA2-202ENST00000470094 SLC8A1P32418 973 aa4.52□□□□□ -1.69
BRCA2-202ENST00000470094 HOXD12P35452 270 aa4.52□□□□□ -1.69
BRCA2-202ENST00000470094 HSF1Q00613 529 aa4.52□□□□□ -1.69
BRCA2-202ENST00000470094 TNFAIP2Q03169 654 aa4.52□□□□□ -1.69
BRCA2-202ENST00000470094 GRM4Q14833 912 aa4.52□□□□□ -1.69
BRCA2-202ENST00000470094 ETFDHQ16134 617 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms