RNA–Protein interactions for RNA: ENST00000465385.5

MMP11-206, Transcript of matrix metallopeptidase 11, human

TSL 2

Gene MMP11, Length 3,823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MMP11-206	ENST00000465385	UNK	Q9C0B0	810 aa	Known RBP	13.99	□□□□□ -0.17
MMP11-206	ENST00000465385	UBE2O	Q9C0C9	1292 aa	Known RBP	13.99	□□□□□ -0.17
MMP11-206	ENST00000465385	DHX33	Q9H6R0	707 aa	Known RBP	13.99	□□□□□ -0.17
MMP11-206	ENST00000465385	CNTN3	Q9P232	1028 aa		13.99	□□□□□ -0.17
MMP11-206	ENST00000465385		F8W8V4	182 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	SIN3B	O75182	1162 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	FKBP6	O75344	327 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	MLH1	P40692	756 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	LAMTOR4	Q0VGL1	99 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	CNGA3	Q16281	694 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	FAM47C	Q5HY64	1035 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	ATF7IP2	Q5U623	682 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	SAMD7	Q7Z3H4	446 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	MYLK4	Q86YV6	388 aa	Predicted RBP	13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	NIPA2	Q8N8Q9	360 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	CEP70	Q8NHQ1	597 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	FAM149B1	Q96BN6	582 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	OLFM3	Q96PB7	478 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	B3GNT5	Q9BYG0	378 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	ELOVL4	Q9GZR5	314 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	PDLIM7	Q9NR12	457 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	ADAMTS6	Q9UKP5	1117 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	CAPN14	A8MX76	684 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	CREB3	O43889	395 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	USP12	O75317	370 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	ENO3	P13929	434 aa	Predicted RBP	13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	PHKA2	P46019	1235 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	CMPK2	Q5EBM0	449 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	PHTF2	Q8N3S3	785 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	ABTB1	Q969K4	478 aa	Predicted RBP	13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	SNRNP25	Q9BV90	132 aa	Known RBP	13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	SDCBP2	Q9H190	292 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	RHBDL2	Q9NX52	303 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	DTNA	Q9Y4J8	743 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	SLX4	Q8IY92	1834 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	MAFG	O15525	162 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	ERVK-10	P10266	1014 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	PTPN7	P35236	360 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	PKNOX1	P55347	436 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	MRPS22	P82650	360 aa	Known RBP	13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	TMEM132B	Q14DG7	1078 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	NCAPG2	Q86XI2	1143 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	CMAS	Q8NFW8	434 aa	Predicted RBP	13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	TMEM176A	Q96HP8	235 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	MARK4	Q96L34	752 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	FAM192A	Q9GZU8	254 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385	TSPAN16	Q9UKR8	245 aa		13.98	□□□□□ -0.17
MMP11-206	ENST00000465385		A0A088AWK7	358 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	MGAT1	P26572	445 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	ABCD1	P33897	745 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	PDK3	Q15120	406 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	CYTH1	Q15438	398 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	LRGUK	Q96M69	825 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	CCDC106	Q9BWC9	280 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	TEX13B	Q9BXU2	312 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	GRIP2	Q9C0E4	1043 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	OCEL1	Q9H607	264 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	CYP2F1	P24903	491 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	ARL2	P36404	184 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	NDST1	P52848	882 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	COG7	P83436	770 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	LY6K	Q17RY6	165 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	GOLGA7B	Q2TAP0	167 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	POTEA	Q6S8J7	498 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	KCNT2	Q6UVM3	1135 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	ADGRF2	Q8IZF7	708 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	ARHGAP18	Q8N392	663 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	SIRPG	Q9P1W8	387 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	CDH22	Q9UJ99	828 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	CNTN6	Q9UQ52	1028 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	INPP5F	Q9Y2H2	1132 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	GOLGA8T	H3BQL2	631 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	PFDN1	O60925	122 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	KLHL2	O95198	593 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	VCL	P18206	1134 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	AP3M2	P53677	418 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	OLIG2	Q13516	323 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	STYK1	Q6J9G0	422 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	DNAAF3	Q8N9W5	541 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	SLC4A11	Q8NBS3	891 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	PCDH19	Q8TAB3	1148 aa		13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	OXCT2	Q9BYC2	517 aa	Predicted RBP	13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	DMAP1	Q9NPF5	467 aa	Predicted RBP	13.97	□□□□□ -0.17
MMP11-206	ENST00000465385	KLHL33	A6NCF5	533 aa		13.96	□□□□□ -0.17
MMP11-206	ENST00000465385	RALB	P11234	206 aa		13.96	□□□□□ -0.17
MMP11-206	ENST00000465385	LCP1	P13796	627 aa		13.96	□□□□□ -0.17
MMP11-206	ENST00000465385	ZNF143	P52747	638 aa	Predicted RBP	13.96	□□□□□ -0.17
MMP11-206	ENST00000465385	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.96	□□□□□ -0.17
MMP11-206	ENST00000465385	ACOT1	Q86TX2	421 aa		13.96	□□□□□ -0.17
MMP11-206	ENST00000465385	OPTN	Q96CV9	577 aa		13.96	□□□□□ -0.17
MMP11-206	ENST00000465385	CPB2	Q96IY4	423 aa		13.96	□□□□□ -0.17
MMP11-206	ENST00000465385	ACO2	Q99798	780 aa	Known RBP	13.96	□□□□□ -0.17
MMP11-206	ENST00000465385	EBNA1BP2	Q99848	306 aa	Known RBP	13.96	□□□□□ -0.17
MMP11-206	ENST00000465385	MYOZ2	Q9NPC6	264 aa		13.96	□□□□□ -0.17
MMP11-206	ENST00000465385	XPNPEP3	Q9NQH7	507 aa		13.96	□□□□□ -0.17
MMP11-206	ENST00000465385	PCDHGC3	Q9UN70	934 aa		13.96	□□□□□ -0.17
MMP11-206	ENST00000465385	EFR3B	Q9Y2G0	817 aa		13.96	□□□□□ -0.17
MMP11-206	ENST00000465385	MFHAS1	Q9Y4C4	1052 aa		13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms