RNA–Protein interactions for RNA: ENST00000463829.1

USP9X-204, Transcript of ubiquitin specific peptidase 9 X-linked, human

TSL 3

Gene USP9X, Length 666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP9X-204	ENST00000463829	LINC01465	Q8N7H1	131 aa		4.88	□□□□□ -1.63
USP9X-204	ENST00000463829	SLC22A17	Q8WUG5	538 aa		4.88	□□□□□ -1.63
USP9X-204	ENST00000463829	VOPP1	Q96AW1	172 aa		4.88	□□□□□ -1.63
USP9X-204	ENST00000463829	REPS1	Q96D71	796 aa		4.88	□□□□□ -1.63
USP9X-204	ENST00000463829	PRR11	Q96HE9	360 aa	Predicted RBP	4.88	□□□□□ -1.63
USP9X-204	ENST00000463829	CCDC17	Q96LX7	622 aa		4.88	□□□□□ -1.63
USP9X-204	ENST00000463829	HS6ST2	Q96MM7	605 aa		4.88	□□□□□ -1.63
USP9X-204	ENST00000463829	SCLT1	Q96NL6	688 aa		4.88	□□□□□ -1.63
USP9X-204	ENST00000463829	PRDM8	Q9NQV8	689 aa		4.88	□□□□□ -1.63
USP9X-204	ENST00000463829	SH3BP4	Q9P0V3	963 aa		4.88	□□□□□ -1.63
USP9X-204	ENST00000463829	ARPP21	Q9UBL0	812 aa	Predicted RBP	4.88	□□□□□ -1.63
USP9X-204	ENST00000463829	FZD4	Q9ULV1	537 aa		4.88	□□□□□ -1.63
USP9X-204	ENST00000463829	UBE2J1	Q9Y385	318 aa	Predicted RBP	4.88	□□□□□ -1.63
USP9X-204	ENST00000463829	TNFRSF18	Q9Y5U5	241 aa		4.88	□□□□□ -1.63
USP9X-204	ENST00000463829	GXYLT2	A0PJZ3	443 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	BTBD19	C9JJ37	291 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	IPO5	O00410	1097 aa	Known RBP	4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	PRAMEF2	O60811	474 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	PROP1	O75360	226 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	RPP40	O75818	363 aa	Known RBP	4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	LARGE1	O95461	756 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	C1R	P00736	705 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	IGLV2-14	P01704	120 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	DHRS4L1	P0CG22	281 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	ALAD	P13716	330 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	APEH	P13798	732 aa	Known RBP	4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	MATN1	P21941	496 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	DUSP1	P28562	367 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	GALNS	P34059	522 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	PTH2R	P49190	550 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	RENBP	P51606	427 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	JAK3	P52333	1124 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	PNLIPRP1	P54315	467 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	CBFB	Q13951	182 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	POSTN	Q15063	836 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	CCDC142	Q17RM4	750 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	TIGD6	Q17RP2	521 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	ZNF569	Q5MCW4	686 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	SUMO4	Q6EEV6	95 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	JMJD6	Q6NYC1	403 aa	Predicted RBP	4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	ACSM6	Q6P461	480 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	NFRKB	Q6P4R8	1299 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	SERPINA13P	Q6UXR4	307 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	RINL	Q6ZS11	566 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	RFX8	Q6ZV50	586 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	MAFA	Q8NHW3	353 aa	Predicted RBP	4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	SCAMP5	Q8TAC9	235 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	ADAMTS18	Q8TE60	1221 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	RUBCN	Q92622	972 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	TBC1D20	Q96BZ9	403 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	FAR2	Q96K12	515 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	FYTTD1	Q96QD9	318 aa	Known RBP	4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	ISCA1	Q9BUE6	129 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	BRD8	Q9H0E9	1235 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	MLXIP	Q9HAP2	919 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	KCNK9	Q9NPC2	374 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	PTGFRN	Q9P2B2	879 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	VPS4A	Q9UN37	437 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	CNTN6	Q9UQ52	1028 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	PCDHB7	Q9Y5E2	793 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	PCDHB2	Q9Y5E7	798 aa		4.87	□□□□□ -1.63
USP9X-204	ENST00000463829	CCDC187	A0A096LP49	1063 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	TCRBV5S1A1T	A0A578	114 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	FAM90A18P	A6NE21	464 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	FAM90A16P	A6NEW6	464 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	FAM90A9P	A6NNJ1	464 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	FAM90A5P	A8MXJ8	464 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	KIF28P	B7ZC32	967 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	POC1B-GALNT4	F8VUJ3	575 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	UBE2Q2L	H0YL09	131 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829		H3BNC9	293 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	CLIC1	O00299	241 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	PPP6R2	O75170	966 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	GCAT	O75600	419 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	FAM90A15P	P0C7V4	464 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	FAM90A14P	P0C7W9	464 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	CST5	P28325	142 aa	Predicted RBP	4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	PPM1F	P49593	454 aa	Predicted RBP	4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	MRPS21	P82921	87 aa	Known RBP	4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	MFSD13A	Q14CX5	517 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	FAM187B	Q17R55	369 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	BTBD16	Q32M84	506 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	TMEM65	Q6PI78	240 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	LDHAL6A	Q6ZMR3	332 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	GALNT4	Q8N4A0	578 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	BOLL	Q8N9W6	283 aa	Known RBP	4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	FAM98A	Q8NCA5	519 aa	Known RBP	4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	OR52L2P	Q8NGH6	319 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	HMGB4	Q8WW32	186 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	GLMP	Q8WWB7	406 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	NELL1	Q92832	810 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	MCRS1	Q96EZ8	462 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	REXO5	Q96IC2	774 aa	Known RBP	4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	FAM167B	Q9BTA0	163 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	DDX23	Q9BUQ8	820 aa	Known RBP	4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	ADGRE3	Q9BY15	652 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	VPS16	Q9H269	839 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	CCDC134	Q9H6E4	229 aa		4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	ELAC1	Q9H777	363 aa	Known RBP	4.86	□□□□□ -1.63
USP9X-204	ENST00000463829	SAYSD1	Q9NPB0	183 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms