RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 MBD2Q9UBB5 411 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 MYOTQ9UBF9 498 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 FTSJ1Q9UET6 329 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 DNM3Q9UQ16 869 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 TSC22D4Q9Y3Q8 395 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 DTNAQ9Y4J8 743 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 MRFAP1Q9Y605 127 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 CAPN7Q9Y6W3 813 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 FMN1Q68DA7 1419 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 PTPRUQ92729 1446 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 NCOA3Q9Y6Q9 1424 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 WDR19Q8NEZ3 1342 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 PLEKHH2Q8IVE3 1493 aa5.7□□□□□ -1.5
VPS41-209ENST00000457055 MYOM1P52179 1685 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 SHANK3Q9BYB0 1731 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 LOC100653049A0A140TA62 436 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 A0A1B0GUA9 196 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 ACOD1A6NK06 481 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 E9PMD0 336 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 M0R2C6 588 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 PLD2O14939 933 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 FMO6PO60774 539 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 EFCAB14O75071 495 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 KRT34O76011 436 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 CAVIN2O95810 425 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 ECDO95905 644 aaPredicted RBP5.69□□□□□ -1.5
VPS41-209ENST00000457055 LRG1P02750 347 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 ADRB2P07550 413 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 MC4RP32245 332 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 PTGS2P35354 604 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 CACNB3P54284 484 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 GFRA1P56159 465 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 TUBA4AP68366 448 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 GUCY1B3Q02153 619 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 SNAPC2Q13487 334 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 STIM1Q13586 685 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 GNA13Q14344 377 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 LONRF2Q1L5Z9 754 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 ERCC6LQ2NKX8 1250 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 ANO4Q32M45 955 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 FNDC3BQ53EP0 1204 aaKnown RBP5.69□□□□□ -1.5
VPS41-209ENST00000457055 HSP90AA5PQ58FG0 334 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 TMEM240Q5SV17 173 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 PKN3Q6P5Z2 889 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 TMC5Q6UXY8 1006 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 RFX8Q6ZV50 586 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 NLRP9Q7RTR0 991 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 SPRED1Q7Z699 444 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 KIAA1328Q86T90 577 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 DPP9Q86TI2 863 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 CIR1Q86X95 450 aaPredicted RBP5.69□□□□□ -1.5
VPS41-209ENST00000457055 NKAIN4Q8IVV8 208 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 KBTBD2Q8IY47 623 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 TMEM145Q8NBT3 493 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 WASF1Q92558 559 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 USP7Q93009 1102 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 EFHD2Q96C19 240 aaPredicted RBP5.69□□□□□ -1.5
VPS41-209ENST00000457055 HSPBAP1Q96EW2 488 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 TXN2Q99757 166 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 PHF20Q9BVI0 1012 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 API5Q9BZZ5 524 aaKnown RBP5.69□□□□□ -1.5
VPS41-209ENST00000457055 THAP9Q9H5L6 903 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 JMJD4Q9H9V9 463 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 SDHAF3Q9NRP4 125 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 INTS7Q9NVH2 962 aaKnown RBP5.69□□□□□ -1.5
VPS41-209ENST00000457055 HSPBP1Q9NZL4 362 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 FAM153AQ9UHL3 310 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 BAG5Q9UL15 447 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 GMEB1Q9Y692 573 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 KIF7Q2M1P5 1343 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 TTC41PQ6P2S7 1318 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 MAPK8IP3Q9UPT6 1336 aa5.69□□□□□ -1.5
VPS41-209ENST00000457055 CCNB3Q8WWL7 1395 aa5.68□□□□□ -1.5
VPS41-209ENST00000457055 NRKQ7Z2Y5 1582 aa5.68□□□□□ -1.5
VPS41-209ENST00000457055 COL22A1Q8NFW1 1626 aaPredicted RBP5.68□□□□□ -1.5
VPS41-209ENST00000457055 UQCRHLA0A096LP55 91 aa5.68□□□□□ -1.5
VPS41-209ENST00000457055 MAGEB16A2A368 324 aa5.68□□□□□ -1.5
VPS41-209ENST00000457055 ZSCAN5CA6NGD5 496 aaPredicted RBP5.68□□□□□ -1.5
VPS41-209ENST00000457055 GPR89AB7ZAQ6 455 aa5.68□□□□□ -1.5
VPS41-209ENST00000457055 TRDMT1O14717 391 aaKnown RBP5.68□□□□□ -1.5
VPS41-209ENST00000457055 GPR42O15529 346 aa5.68□□□□□ -1.5
VPS41-209ENST00000457055 ASAP2O43150 1006 aa5.68□□□□□ -1.5
VPS41-209ENST00000457055 PIAS2O75928 621 aa5.68□□□□□ -1.5
VPS41-209ENST00000457055 RTN3O95197 1032 aaPredicted RBP5.68□□□□□ -1.5
VPS41-209ENST00000457055 ZBED1O96006 694 aa5.68□□□□□ -1.5
VPS41-209ENST00000457055 CHGBP05060 677 aa5.68□□□□□ -1.5
VPS41-209ENST00000457055 UQCRHP07919 91 aa5.68□□□□□ -1.5
VPS41-209ENST00000457055 ENO2P09104 434 aaPredicted RBP5.68□□□□□ -1.5
VPS41-209ENST00000457055 GPR89BP0CG08 455 aa5.68□□□□□ -1.5
VPS41-209ENST00000457055 PYGMP11217 842 aa5.68□□□□□ -1.5
VPS41-209ENST00000457055 XRCC6P12956 609 aaKnown RBP eCLIP5.68□□□□□ -1.5
VPS41-209ENST00000457055 IDO1P14902 403 aa5.68□□□□□ -1.5
VPS41-209ENST00000457055 ABCB4P21439 1286 aa5.68□□□□□ -1.5
VPS41-209ENST00000457055 TACR2P21452 398 aa5.68□□□□□ -1.5
VPS41-209ENST00000457055 ANXA13P27216 316 aa5.68□□□□□ -1.5
VPS41-209ENST00000457055 DIO1P49895 249 aa5.68□□□□□ -1.5
VPS41-209ENST00000457055 ARL4CP56559 192 aa5.68□□□□□ -1.5
VPS41-209ENST00000457055 SLC8A3P57103 927 aa5.68□□□□□ -1.5
VPS41-209ENST00000457055 EIF4A1P60842 406 aaKnown RBP5.68□□□□□ -1.5
VPS41-209ENST00000457055 SSTP61278 116 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms