RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 GRIP2Q9C0E4 1043 aa16.32■□□□□ 0.2
CHRD-205ENST00000448472 SIRPGQ9P1W8 387 aa16.32■□□□□ 0.2
CHRD-205ENST00000448472 CDH22Q9UJ99 828 aa16.32■□□□□ 0.2
CHRD-205ENST00000448472 PLA2G4CQ9UP65 541 aa16.32■□□□□ 0.2
CHRD-205ENST00000448472 FOCADQ5VW36 1801 aa16.32■□□□□ 0.2
CHRD-205ENST00000448472 WNK3Q9BYP7 1800 aa16.32■□□□□ 0.2
CHRD-205ENST00000448472 RALBP11234 206 aa16.32■□□□□ 0.2
CHRD-205ENST00000448472 CRABP2P29373 138 aa16.32■□□□□ 0.2
CHRD-205ENST00000448472 MLH1P40692 756 aa16.32■□□□□ 0.2
CHRD-205ENST00000448472 ASPAP45381 313 aa16.32■□□□□ 0.2
CHRD-205ENST00000448472 MRPS22P82650 360 aaKnown RBP16.32■□□□□ 0.2
CHRD-205ENST00000448472 FOLH1Q04609 750 aa16.32■□□□□ 0.2
CHRD-205ENST00000448472 FSTL1Q12841 308 aa16.32■□□□□ 0.2
CHRD-205ENST00000448472 TBCCQ15814 346 aa16.32■□□□□ 0.2
CHRD-205ENST00000448472 EEF1DP3Q658K8 133 aa16.32■□□□□ 0.2
CHRD-205ENST00000448472 NIM1KQ8IY84 436 aa16.32■□□□□ 0.2
CHRD-205ENST00000448472 TMEM176AQ96HP8 235 aa16.32■□□□□ 0.2
CHRD-205ENST00000448472 PGLYRP2Q96PD5 576 aa16.32■□□□□ 0.2
CHRD-205ENST00000448472 EBNA1BP2Q99848 306 aaKnown RBP16.32■□□□□ 0.2
CHRD-205ENST00000448472 PDLIM7Q9NR12 457 aa16.32■□□□□ 0.2
CHRD-205ENST00000448472 CNTN6Q9UQ52 1028 aa16.32■□□□□ 0.2
CHRD-205ENST00000448472 KLF11O14901 512 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 TSHRP16473 764 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 PMLP29590 882 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 SERPINB9P50453 376 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 PKNOX1P55347 436 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 ATF7IP2Q5U623 682 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 ACAD11Q709F0 780 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 ADGRF2Q8IZF7 708 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 PHTF2Q8N3S3 785 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 MOCOSQ96EN8 888 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 MAGEB5Q9BZ81 275 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 DHX33Q9H6R0 707 aaKnown RBP16.31■□□□□ 0.2
CHRD-205ENST00000448472 ACAD9Q9H845 621 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 POMPQ9Y244 141 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 MYOCOSA0A1B0GUC4 107 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 CLPTM1O96005 669 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 NFICP08651 508 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 VAV1P15498 845 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 ADORA2AP29274 412 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 TMED1Q13445 227 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 CCDC142Q17RM4 750 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 KCNT2Q6UVM3 1135 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 FAM183BPQ6ZVS7 135 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 FAM149B1Q96BN6 582 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 OCEL1Q9H607 264 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 PCDHGC3Q9UN70 934 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 ARHGAP26Q9UNA1 814 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 TRDMT1O14717 391 aaKnown RBP16.31■□□□□ 0.2
CHRD-205ENST00000448472 ERVK-10P10266 1014 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 ZNF143P52747 638 aaPredicted RBP16.31■□□□□ 0.2
CHRD-205ENST00000448472 R3HDM1Q15032 1099 aaKnown RBP16.31■□□□□ 0.2
CHRD-205ENST00000448472 SLC5A9Q2M3M2 681 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 KRT27Q7Z3Y8 459 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 DNAAF3Q8N9W5 541 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 ELOVL4Q9GZR5 314 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 RNF19AQ9NV58 838 aa16.31■□□□□ 0.2
CHRD-205ENST00000448472 MAP3K20Q9NYL2 800 aaKnown RBP16.31■□□□□ 0.2
CHRD-205ENST00000448472 PPP1R1BQ9UD71 204 aaPredicted RBP16.31■□□□□ 0.2
CHRD-205ENST00000448472 SDR42E2A6NKP2 422 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 HNRNPRO43390 633 aaKnown RBP16.3■□□□□ 0.2
CHRD-205ENST00000448472 MGAT1P26572 445 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 CRHR1P34998 444 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 TCF7P36402 384 aaPredicted RBP16.3■□□□□ 0.2
CHRD-205ENST00000448472 ATXN1P54253 815 aaKnown RBP16.3■□□□□ 0.2
CHRD-205ENST00000448472 LAMTOR4Q0VGL1 99 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 SURF1Q15526 300 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 TMCO4Q5TGY1 634 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 ADAM32Q8TC27 787 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 NAT14Q8WUY8 206 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 SCYL1Q96KG9 808 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 PRPF18Q99633 342 aaKnown RBP16.3■□□□□ 0.2
CHRD-205ENST00000448472 SNRNP25Q9BV90 132 aaKnown RBP16.3■□□□□ 0.2
CHRD-205ENST00000448472 QTRT2Q9H974 415 aaKnown RBP16.3■□□□□ 0.2
CHRD-205ENST00000448472 TSPAN16Q9UKR8 245 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 STYXL1Q9Y6J8 313 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 C15orf38-AP3S2A0A0A6YYH1 394 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 GLRA3O75311 464 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 USP12O75317 370 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 CYP2F1P24903 491 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 ARL2P36404 184 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 EFNA5P52803 228 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 RBM44Q6ZP01 1051 aaKnown RBP16.3■□□□□ 0.2
CHRD-205ENST00000448472 FRMD7Q6ZUT3 714 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 ARPINQ7Z6K5 226 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 PDSS2Q86YH6 399 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 CDKL3Q8IVW4 592 aaPredicted RBP16.3■□□□□ 0.2
CHRD-205ENST00000448472 SREK1Q8WXA9 508 aaKnown RBP16.3■□□□□ 0.2
CHRD-205ENST00000448472 IFT43Q96FT9 208 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 SDCBP2Q9H190 292 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 Q9H521 79 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 COPS7BQ9H9Q2 264 aaPredicted RBP16.3■□□□□ 0.2
CHRD-205ENST00000448472 USP29Q9HBJ7 922 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 GPAMQ9HCL2 828 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 XPNPEP3Q9NQH7 507 aa16.3■□□□□ 0.2
CHRD-205ENST00000448472 GREB1LQ9C091 1923 aaPredicted RBP16.3■□□□□ 0.2
CHRD-205ENST00000448472 CLCN3P51790 818 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 CHN2P52757 468 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 FAM160B1Q5W0V3 765 aa16.29■□□□□ 0.2
CHRD-205ENST00000448472 PCDH19Q8TAB3 1148 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms