RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 LSM8O95777 96 aaKnown RBP8.09□□□□□ -1.12
SMG1-202ENST00000446231 IFNA8P32881 189 aa8.09□□□□□ -1.12
SMG1-202ENST00000446231 ZNF720Q7Z2F6 126 aa8.09□□□□□ -1.12
SMG1-202ENST00000446231 CCDC117Q8IWD4 279 aaPredicted RBP8.09□□□□□ -1.12
SMG1-202ENST00000446231 ENKURQ8TC29 256 aa8.09□□□□□ -1.12
SMG1-202ENST00000446231 MTMR9Q96QG7 549 aa8.09□□□□□ -1.12
SMG1-202ENST00000446231 TTYH3Q9C0H2 523 aa8.09□□□□□ -1.12
SMG1-202ENST00000446231 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.09□□□□□ -1.12
SMG1-202ENST00000446231 ERVK-11Q9UQG0 969 aa8.09□□□□□ -1.12
SMG1-202ENST00000446231 VPS4BO75351 444 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 C4BPBP20851 252 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 CCNYL2Q5T2Q4 361 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 FAM47BQ8NA70 645 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 NAT9Q9BTE0 207 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 SESN1Q9Y6P5 492 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 MYH15Q9Y2K3 1946 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 BTN3A3O00478 584 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 C2CD6Q53TS8 623 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 BHMTQ93088 406 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 LRRC4Q9HBW1 653 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 MTMR4Q9NYA4 1195 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 SPTA1P02549 2419 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 NADKO95544 446 aaPredicted RBP8.08□□□□□ -1.12
SMG1-202ENST00000446231 ZFP69Q49AA0 526 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 DSTYKQ6XUX3 929 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 C12orf50Q8NA57 414 aaPredicted RBP8.08□□□□□ -1.12
SMG1-202ENST00000446231 POC5Q8NA72 575 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 MBOAT7Q96N66 472 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 SLC25A23Q9BV35 468 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 TPRKBQ9Y3C4 175 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 A0A1W2PPM1 405 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 UNC45BQ8IWX7 931 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 TAS1R2Q8TE23 839 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 C7orf26Q96N11 449 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 PRPF19Q9UMS4 504 aaKnown RBP8.08□□□□□ -1.12
SMG1-202ENST00000446231 RWDD3Q9Y3V2 267 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 FOXR2Q6PJQ5 311 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 C8orf4Q9NR00 106 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 CCDC162PA2VCL2 907 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 EXTL3O43909 919 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 WBP4O75554 376 aaKnown RBP8.08□□□□□ -1.12
SMG1-202ENST00000446231 CSTF3Q12996 717 aaKnown RBP8.08□□□□□ -1.12
SMG1-202ENST00000446231 MTX3Q5HYI7 312 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 CIAPIN1Q6FI81 312 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 BPIFB6Q8NFQ5 453 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 SEPT1Q8WYJ6 367 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 TSPAN18Q96SJ8 248 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 KLHL3Q9UH77 587 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 MRASO14807 208 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 MED24O75448 989 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 BANF1O75531 89 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 ATP6V1B2P21281 511 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 FAM98BQ52LJ0 330 aaKnown RBP8.08□□□□□ -1.12
SMG1-202ENST00000446231 CBR4Q8N4T8 237 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 GLRA3O75311 464 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 PGAM1P18669 254 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 GP5P40197 560 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 SLC18A1P54219 525 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 MOGQ16653 247 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 CDH22Q9UJ99 828 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 ANAPC2Q9UJX6 822 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 SYNPO2Q9UMS6 1093 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 NCAPD2Q15021 1401 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 FAM84BQ96KN1 310 aaPredicted RBP8.08□□□□□ -1.12
SMG1-202ENST00000446231 PXDNLA1KZ92 1463 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 LZTS3O60299 673 aaPredicted RBP8.08□□□□□ -1.12
SMG1-202ENST00000446231 PIAS1O75925 651 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.08□□□□□ -1.125e-6■■■■□ 22.3
SMG1-202ENST00000446231 DSEQ9UL01 958 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 ATP7AQ04656 1500 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 PDGFRBP09619 1106 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 CCT3P49368 545 aaKnown RBP8.08□□□□□ -1.12
SMG1-202ENST00000446231 NSUN2Q08J23 767 aaKnown RBP eCLIP8.08□□□□□ -1.12
SMG1-202ENST00000446231 SPRED3Q2MJR0 410 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 RALGPS1Q5JS13 557 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 KLHL35Q6PF15 583 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 OR7A2PQ8NGA2 310 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 FANCEQ9HB96 536 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 PLCE1Q9P212 2302 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 SUPT3HB4E1H0 165 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 ANKRD63C9JTQ0 380 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 ZSCAN9O15535 394 aaPredicted RBP8.08□□□□□ -1.12
SMG1-202ENST00000446231 GRAP2O75791 330 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 GPC3P51654 580 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 FASTKQ14296 549 aaKnown RBP8.08□□□□□ -1.12
SMG1-202ENST00000446231 SGO1Q5FBB7 561 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 NSMCE3Q96MG7 304 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 AVENQ9NQS1 362 aaPredicted RBP8.08□□□□□ -1.12
SMG1-202ENST00000446231 RBAKQ9NYW8 714 aaPredicted RBP8.08□□□□□ -1.12
SMG1-202ENST00000446231 STOML2Q9UJZ1 356 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 STXBP5LQ9Y2K9 1186 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 CRKLP46109 303 aaKnown RBP8.08□□□□□ -1.12
SMG1-202ENST00000446231 FAM71AQ8IYT1 594 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 A2ML1A8K2U0 1454 aa8.08□□□□□ -1.12
SMG1-202ENST00000446231 CHADO15335 359 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 ZBTB46Q86UZ6 589 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 KCTD17Q8N5Z5 321 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 GLIS3Q8NEA6 775 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 PROX1Q92786 737 aa8.07□□□□□ -1.12
SMG1-202ENST00000446231 POLBP06746 335 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms