RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 PAAF1Q9BRP4 392 aa5.62□□□□□ -1.51
PFDN4-202ENST00000441080 TMEM120AQ9BXJ8 343 aa5.62□□□□□ -1.51
PFDN4-202ENST00000441080 R3HDMLQ9H3Y0 253 aa5.62□□□□□ -1.51
PFDN4-202ENST00000441080 MYH16Q9H6N6 1097 aa5.62□□□□□ -1.51
PFDN4-202ENST00000441080 FZD4Q9ULV1 537 aa5.62□□□□□ -1.51
PFDN4-202ENST00000441080 SPATA31A6Q5VVP1 1343 aa5.62□□□□□ -1.51
PFDN4-202ENST00000441080 CCDC187A0A096LP49 1063 aa5.61□□□□□ -1.51
PFDN4-202ENST00000441080 UBE2Q2LH0YL09 131 aa5.61□□□□□ -1.51
PFDN4-202ENST00000441080 PPP6R2O75170 966 aa5.61□□□□□ -1.51
PFDN4-202ENST00000441080 MATN1P21941 496 aa5.61□□□□□ -1.51
PFDN4-202ENST00000441080 KCNB1Q14721 858 aa5.61□□□□□ -1.51
PFDN4-202ENST00000441080 MFSD13AQ14CX5 517 aa5.61□□□□□ -1.51
PFDN4-202ENST00000441080 FAM187BQ17R55 369 aa5.61□□□□□ -1.51
PFDN4-202ENST00000441080 TIGD6Q17RP2 521 aa5.61□□□□□ -1.51
PFDN4-202ENST00000441080 C4orf46Q504U0 113 aa5.61□□□□□ -1.51
PFDN4-202ENST00000441080 INO80DQ53TQ3 878 aaPredicted RBP5.61□□□□□ -1.51
PFDN4-202ENST00000441080 FCRLBQ6BAA4 426 aa5.61□□□□□ -1.51
PFDN4-202ENST00000441080 TANGO2Q6ICL3 276 aa5.61□□□□□ -1.51
PFDN4-202ENST00000441080 SLC44A2Q8IWA5 706 aaPredicted RBP5.61□□□□□ -1.51
PFDN4-202ENST00000441080 NELL1Q92832 810 aa5.61□□□□□ -1.51
PFDN4-202ENST00000441080 MCRS1Q96EZ8 462 aa5.61□□□□□ -1.51
PFDN4-202ENST00000441080 ADGRE3Q9BY15 652 aa5.61□□□□□ -1.51
PFDN4-202ENST00000441080 PABPC3Q9H361 631 aaKnown RBP5.61□□□□□ -1.51
PFDN4-202ENST00000441080 MLXIPQ9HAP2 919 aa5.61□□□□□ -1.51
PFDN4-202ENST00000441080 PRDM8Q9NQV8 689 aa5.61□□□□□ -1.51
PFDN4-202ENST00000441080 PCDHB7Q9Y5E2 793 aa5.61□□□□□ -1.51
PFDN4-202ENST00000441080 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.6□□□□□ -1.51
PFDN4-202ENST00000441080 TCRBV5S1A1TA0A578 114 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 PLEKHD1A6NEE1 506 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 KIF28PB7ZC32 967 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 BTBD19C9JJ37 291 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 POC1B-GALNT4F8VUJ3 575 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 M0QZQ0 153 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 CLIC1O00299 241 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 IPO5O00410 1097 aaKnown RBP5.6□□□□□ -1.51
PFDN4-202ENST00000441080 FYB1O15117 783 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 PIP5K1CO60331 668 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 C1RP00736 705 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 MBPP02686 304 aaPredicted RBP5.6□□□□□ -1.51
PFDN4-202ENST00000441080 THBS4P35443 961 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 PNLIPRP1P54315 467 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 INHBEP58166 350 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 WDR5P61964 334 aaKnown RBP5.6□□□□□ -1.51
PFDN4-202ENST00000441080 SF3A3Q12874 501 aaKnown RBP eCLIP5.6□□□□□ -1.51
PFDN4-202ENST00000441080 LARS2Q15031 903 aaKnown RBP5.6□□□□□ -1.51
PFDN4-202ENST00000441080 POSTNQ15063 836 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 ZRSR2Q15696 482 aaKnown RBP5.6□□□□□ -1.51
PFDN4-202ENST00000441080 TRIM60Q495X7 471 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 CERKLQ49MI3 558 aaPredicted RBP5.6□□□□□ -1.51
PFDN4-202ENST00000441080 TMEM119Q4V9L6 283 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 PRAMEF17Q5VTA0 474 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 JMJD6Q6NYC1 403 aaPredicted RBP5.6□□□□□ -1.51
PFDN4-202ENST00000441080 ACSM6Q6P461 480 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 VSTM1Q6UX27 236 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 RAB11FIP2Q7L804 512 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 ADGRG3Q86Y34 549 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 GALNT4Q8N4A0 578 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 PNLDC1Q8NA58 520 aaKnown RBP5.6□□□□□ -1.51
PFDN4-202ENST00000441080 OR52L2PQ8NGH6 319 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 OTUD7AQ8TE49 926 aaPredicted RBP5.6□□□□□ -1.51
PFDN4-202ENST00000441080 ADAMTS18Q8TE60 1221 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 FAR2Q96K12 515 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 BRD8Q9H0E9 1235 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 CCDC134Q9H6E4 229 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 ABHD10Q9NUJ1 306 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 GAR1Q9NY12 217 aaKnown RBP5.6□□□□□ -1.51
PFDN4-202ENST00000441080 CNTN6Q9UQ52 1028 aa5.6□□□□□ -1.51
PFDN4-202ENST00000441080 FAM90A18PA6NE21 464 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 FAM90A16PA6NEW6 464 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 HMX3A6NHT5 357 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 FAM90A9PA6NNJ1 464 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 FAM90A5PA8MXJ8 464 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 H3BNC9 293 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 SLC3A2P08195 630 aaKnown RBP5.59□□□□□ -1.51
PFDN4-202ENST00000441080 FAM90A15PP0C7V4 464 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 FAM90A14PP0C7W9 464 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 NHLRC4P0CG21 123 aaPredicted RBP5.59□□□□□ -1.51
PFDN4-202ENST00000441080 DUSP1P28562 367 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 PROSER3Q2NL68 480 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 ZNF569Q5MCW4 686 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 ANKRD40Q6AI12 368 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 NFRKBQ6P4R8 1299 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 C16orf89Q6UX73 402 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 GALNT15Q8N3T1 639 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 SCAMP5Q8TAC9 235 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 HMGB4Q8WW32 186 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 GLMPQ8WWB7 406 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 NPIPB3Q92617 1050 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 RUBCNQ92622 972 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 TRIM63Q969Q1 353 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 KAZALD1Q96I82 304 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 REXO5Q96IC2 774 aaKnown RBP5.59□□□□□ -1.51
PFDN4-202ENST00000441080 HIC2Q96JB3 615 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 RITA1Q96K30 269 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 CDCP1Q9H5V8 836 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 ELAC1Q9H777 363 aaKnown RBP5.59□□□□□ -1.51
PFDN4-202ENST00000441080 KCNK9Q9NPC2 374 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 DAPP1Q9UN19 280 aa5.59□□□□□ -1.51
PFDN4-202ENST00000441080 POLR2AP24928 1970 aaKnown RBP5.58□□□□□ -1.52
PFDN4-202ENST00000441080 AOX1Q06278 1338 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms