RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 ADAMTS9Q9P2N4 1935 aa17.59■□□□□ 0.41
COL16A1-204ENST00000440437 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.58■□□□□ 0.4
COL16A1-204ENST00000440437 PTGER3P43115 390 aa17.58■□□□□ 0.4
COL16A1-204ENST00000440437 ZNF132P52740 706 aa17.58■□□□□ 0.4
COL16A1-204ENST00000440437 GCNT1Q02742 428 aa17.58■□□□□ 0.4
COL16A1-204ENST00000440437 PAK1Q13153 545 aa17.58■□□□□ 0.4
COL16A1-204ENST00000440437 GEN1Q17RS7 908 aa17.58■□□□□ 0.4
COL16A1-204ENST00000440437 BSPRYQ5W0U4 402 aa17.58■□□□□ 0.4
COL16A1-204ENST00000440437 FMNL3Q8IVF7 1028 aa17.58■□□□□ 0.4
COL16A1-204ENST00000440437 TMEFF1Q8IYR6 380 aa17.58■□□□□ 0.4
COL16A1-204ENST00000440437 SIX6OS1Q8N1H7 587 aa17.58■□□□□ 0.4
COL16A1-204ENST00000440437 PIWIL1Q96J94 861 aaKnown RBP17.58■□□□□ 0.4
COL16A1-204ENST00000440437 IPO9Q96P70 1041 aaKnown RBP17.58■□□□□ 0.4
COL16A1-204ENST00000440437 ABCC13Q9NSE7 274 aa17.58■□□□□ 0.4
COL16A1-204ENST00000440437 EVLQ9UI08 416 aaPredicted RBP17.58■□□□□ 0.4
COL16A1-204ENST00000440437 HBS1LQ9Y450 684 aaKnown RBP17.58■□□□□ 0.4
COL16A1-204ENST00000440437 RAD54BQ9Y620 910 aa17.58■□□□□ 0.4
COL16A1-204ENST00000440437 PCDH15Q96QU1 1955 aa17.58■□□□□ 0.4
COL16A1-204ENST00000440437 CNOT1A5YKK6 2376 aaKnown RBP17.57■□□□□ 0.4
COL16A1-204ENST00000440437 IGHV1OR15-9A0A0B4J2B8 117 aa17.57■□□□□ 0.4
COL16A1-204ENST00000440437 KHNYNO15037 678 aaKnown RBP17.57■□□□□ 0.4
COL16A1-204ENST00000440437 GNA14O95837 355 aa17.57■□□□□ 0.4
COL16A1-204ENST00000440437 BRD2P25440 801 aaKnown RBP17.57■□□□□ 0.4
COL16A1-204ENST00000440437 STX17P56962 302 aa17.57■□□□□ 0.4
COL16A1-204ENST00000440437 CETN1Q12798 172 aa17.57■□□□□ 0.4
COL16A1-204ENST00000440437 KCNH2Q12809 1159 aa17.57■□□□□ 0.4
COL16A1-204ENST00000440437 ENPP2Q13822 863 aa17.57■□□□□ 0.4
COL16A1-204ENST00000440437 STILQ15468 1287 aa17.57■□□□□ 0.4
COL16A1-204ENST00000440437 CNGA2Q16280 664 aa17.57■□□□□ 0.4
COL16A1-204ENST00000440437 PEAR1Q5VY43 1037 aaPredicted RBP17.57■□□□□ 0.4
COL16A1-204ENST00000440437 SDE2Q6IQ49 451 aa17.57■□□□□ 0.4
COL16A1-204ENST00000440437 PMF1Q6P1K2 205 aa17.57■□□□□ 0.4
COL16A1-204ENST00000440437 MSANTD2Q6P1R3 559 aa17.57■□□□□ 0.4
COL16A1-204ENST00000440437 ARMCX6Q7L4S7 300 aa17.57■□□□□ 0.4
COL16A1-204ENST00000440437 RBBP8NLQ8NC74 664 aaPredicted RBP17.57■□□□□ 0.4
COL16A1-204ENST00000440437 EHBP1Q8NDI1 1231 aa17.57■□□□□ 0.4
COL16A1-204ENST00000440437 EDEM1Q92611 657 aa17.57■□□□□ 0.4
COL16A1-204ENST00000440437 PIGKQ92643 395 aa17.57■□□□□ 0.4
COL16A1-204ENST00000440437 LSM14BQ9BX40 385 aaKnown RBP17.57■□□□□ 0.4
COL16A1-204ENST00000440437 TMEM74BQ9NUR3 256 aa17.57■□□□□ 0.4
COL16A1-204ENST00000440437 SFMBT1Q9UHJ3 866 aa17.57■□□□□ 0.4
COL16A1-204ENST00000440437 STOML2Q9UJZ1 356 aa17.57■□□□□ 0.4
COL16A1-204ENST00000440437 CLEC4EQ9ULY5 219 aa17.57■□□□□ 0.4
COL16A1-204ENST00000440437 WASH3PC4AMC7 463 aa17.56■□□□□ 0.4
COL16A1-204ENST00000440437 M0QYV0 167 aa17.56■□□□□ 0.4
COL16A1-204ENST00000440437 CDX4O14627 284 aaPredicted RBP17.56■□□□□ 0.4
COL16A1-204ENST00000440437 MAP3K13O43283 966 aa17.56■□□□□ 0.4
COL16A1-204ENST00000440437 AP5Z1O43299 807 aa17.56■□□□□ 0.4
COL16A1-204ENST00000440437 CALCAP01258 141 aa17.56■□□□□ 0.4
COL16A1-204ENST00000440437 CYBBP04839 570 aa17.56■□□□□ 0.4
COL16A1-204ENST00000440437 LCP1P13796 627 aa17.56■□□□□ 0.4
COL16A1-204ENST00000440437 RGS7P49802 495 aa17.56■□□□□ 0.4
COL16A1-204ENST00000440437 LYSMD4Q5XG99 296 aa17.56■□□□□ 0.4
COL16A1-204ENST00000440437 RRAGAQ7L523 313 aa17.56■□□□□ 0.4
COL16A1-204ENST00000440437 ANKS1BQ7Z6G8 1248 aa17.56■□□□□ 0.4
COL16A1-204ENST00000440437 SYT12Q8IV01 421 aa17.56■□□□□ 0.4
COL16A1-204ENST00000440437 TRIML1Q8N9V2 468 aa17.56■□□□□ 0.4
COL16A1-204ENST00000440437 RNF139Q8WU17 664 aa17.56■□□□□ 0.4
COL16A1-204ENST00000440437 IRGQQ8WZA9 623 aa17.56■□□□□ 0.4
COL16A1-204ENST00000440437 ERLEC1Q96DZ1 483 aa17.56■□□□□ 0.4
COL16A1-204ENST00000440437 KREMEN1Q96MU8 473 aa17.56■□□□□ 0.4
COL16A1-204ENST00000440437 CD93Q9NPY3 652 aa17.56■□□□□ 0.4
COL16A1-204ENST00000440437 THAP10Q9P2Z0 257 aaPredicted RBP17.56■□□□□ 0.4
COL16A1-204ENST00000440437 STON1Q9Y6Q2 735 aa17.56■□□□□ 0.4
COL16A1-204ENST00000440437 ATXN2Q99700 1313 aaKnown RBP17.55■□□□□ 0.4
COL16A1-204ENST00000440437 C4orf47A7E2U8 309 aa17.55■□□□□ 0.4
COL16A1-204ENST00000440437 NPC1O15118 1278 aa17.55■□□□□ 0.4
COL16A1-204ENST00000440437 MSI1O43347 362 aaKnown RBP17.55■□□□□ 0.4
COL16A1-204ENST00000440437 ZNF217O75362 1048 aa17.55■□□□□ 0.4
COL16A1-204ENST00000440437 LATS1O95835 1130 aa17.55■□□□□ 0.4
COL16A1-204ENST00000440437 AFPP02771 609 aaKnown RBP17.55■□□□□ 0.4
COL16A1-204ENST00000440437 HOXD9P28356 352 aaPredicted RBP17.55■□□□□ 0.4
COL16A1-204ENST00000440437 IL12RB1P42701 662 aa17.55■□□□□ 0.4
COL16A1-204ENST00000440437 HARS2P49590 506 aaKnown RBP17.55■□□□□ 0.4
COL16A1-204ENST00000440437 IRX4P78413 519 aa17.55■□□□□ 0.4
COL16A1-204ENST00000440437 SLC36A4Q6YBV0 504 aa17.55■□□□□ 0.4
COL16A1-204ENST00000440437 CLEC4CQ8WTT0 213 aa17.55■□□□□ 0.4
COL16A1-204ENST00000440437 MRGPRX1Q96LB2 322 aa17.55■□□□□ 0.4
COL16A1-204ENST00000440437 HSFY1Q96LI6 401 aa17.55■□□□□ 0.4
COL16A1-204ENST00000440437 SRRTQ9BXP5 876 aaKnown RBP17.55■□□□□ 0.4
COL16A1-204ENST00000440437 SLC2A11Q9BYW1 496 aa17.55■□□□□ 0.4
COL16A1-204ENST00000440437 SLC6A17Q9H1V8 727 aa17.55■□□□□ 0.4
COL16A1-204ENST00000440437 PILRBQ9UKJ0 227 aa17.55■□□□□ 0.4
COL16A1-204ENST00000440437 CNTN6Q9UQ52 1028 aa17.55■□□□□ 0.4
COL16A1-204ENST00000440437 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.55■□□□□ 0.4
COL16A1-204ENST00000440437 PIK3R2O00459 728 aa17.54■□□□□ 0.4
COL16A1-204ENST00000440437 IGLV3-27P01718 113 aa17.54■□□□□ 0.4
COL16A1-204ENST00000440437 LTFP02788 710 aa17.54■□□□□ 0.4
COL16A1-204ENST00000440437 KCNA4P22459 653 aa17.54■□□□□ 0.4
COL16A1-204ENST00000440437 ITPKAP23677 461 aa17.54■□□□□ 0.4
COL16A1-204ENST00000440437 HOXD12P35452 270 aa17.54■□□□□ 0.4
COL16A1-204ENST00000440437 DPP6P42658 865 aa17.54■□□□□ 0.4
COL16A1-204ENST00000440437 ZNF445P59923 1031 aa17.54■□□□□ 0.4
COL16A1-204ENST00000440437 RPL6Q02878 288 aaKnown RBP17.54■□□□□ 0.4
COL16A1-204ENST00000440437 EIF4HQ15056 248 aaKnown RBP17.54■□□□□ 0.4
COL16A1-204ENST00000440437 FUT11Q495W5 492 aa17.54■□□□□ 0.4
COL16A1-204ENST00000440437 MPPE1Q53F39 396 aa17.54■□□□□ 0.4
COL16A1-204ENST00000440437 TRIM61Q5EBN2 209 aa17.54■□□□□ 0.4
COL16A1-204ENST00000440437 TMEM215Q68D42 235 aa17.54■□□□□ 0.4
COL16A1-204ENST00000440437 DDI1Q8WTU0 396 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms