RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 TMEM259Q4ZIN3 620 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 SPDYCQ5MJ68 293 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 SYCP2LQ5T4T6 812 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 SNX30Q5VWJ9 437 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 SPOPLQ6IQ16 392 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 KIAA1324Q6UXG2 1013 aaKnown RBP8.17□□□□□ -1.1
VPS50-204ENST00000438395 TPGS1Q6ZTW0 290 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 TMEM25Q86YD3 366 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 MIB1Q86YT6 1006 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 SFTPA1Q8IWL2 248 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 ETFBKMTQ8IXQ9 262 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 CRYBG2Q8N1P7 616 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 ARHGAP18Q8N392 663 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 C12orf29Q8N999 325 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 OLIG1Q8TAK6 271 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 CEP76Q8TAP6 659 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 ELMO3Q96BJ8 720 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 SMOQ99835 787 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 DUSP9Q99956 384 aaKnown RBP8.17□□□□□ -1.1
VPS50-204ENST00000438395 GTPBP2Q9BX10 602 aaKnown RBP8.17□□□□□ -1.1
VPS50-204ENST00000438395 GZF1Q9H116 711 aaPredicted RBP8.17□□□□□ -1.1
VPS50-204ENST00000438395 SDCBP2Q9H190 292 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 PNPLA8Q9NP80 782 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 DMAC2Q9NW81 257 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 PGPEP1Q9NXJ5 209 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 IL37Q9NZH6 218 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 CALCOCO1Q9P1Z2 691 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 STRIP2Q9ULQ0 834 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 SCML2Q9UQR0 700 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 ATP6V1DQ9Y5K8 247 aa8.17□□□□□ -1.1
VPS50-204ENST00000438395 ATXN2Q99700 1313 aaKnown RBP8.17□□□□□ -1.1
VPS50-204ENST00000438395 A0A1W2PQH9 124 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 FAM92AA1XBS5 289 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 MAPK13O15264 365 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 ADAM23O75077 832 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 TBX18O95935 607 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 ZDHHC11BP0C7U3 371 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 TRIM49P0CI25 452 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 TRIM49CP0CI26 452 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 EPB41P11171 864 aaKnown RBP8.16□□□□□ -1.1
VPS50-204ENST00000438395 RARGP13631 454 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 HNRNPLP14866 589 aaKnown RBP eCLIP8.16□□□□□ -1.1
VPS50-204ENST00000438395 ENGP17813 658 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 CSRP1P21291 193 aaKnown RBP8.16□□□□□ -1.1
VPS50-204ENST00000438395 PLA2G4AP47712 749 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 DGKGP49619 791 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 RELBQ01201 579 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 ARID5AQ03989 594 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 INCA1Q0VD86 236 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 DUOXA1Q1HG43 343 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 MAP7D1Q3KQU3 841 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 EGFLAMQ63HQ2 1017 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 KLHDC10Q6PID8 442 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 CLEC20AQ6ZU45 233 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 PAQR9Q6ZVX9 377 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 HTR3DQ70Z44 454 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 RGL4Q8IZJ4 473 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 DEFB124Q8NES8 71 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 UCMAQ8WVF2 138 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 ATG2BQ96BY7 2078 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 CYFIP2Q96F07 1278 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 HEXIM2Q96MH2 286 aaKnown RBP8.16□□□□□ -1.1
VPS50-204ENST00000438395 HNRNPABQ99729 332 aaKnown RBP8.16□□□□□ -1.1
VPS50-204ENST00000438395 DCLK3Q9C098 648 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 KCTD10Q9H3F6 313 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 CSNK1G1Q9HCP0 422 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 CYLDQ9NQC7 956 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 SUSD2Q9UGT4 822 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 RASAL2Q9UJF2 1139 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 RCOR1Q9UKL0 485 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 SLC6A14Q9UN76 642 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 CYP8B1Q9UNU6 501 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 TRAF3IP3Q9Y228 551 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 ZNF510Q9Y2H8 683 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 GPSM3Q9Y4H4 160 aa8.16□□□□□ -1.1
VPS50-204ENST00000438395 CACNA1EQ15878 2313 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 GON4LQ3T8J9 2241 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 GREB1Q4ZG55 1949 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 OBSL1O75147 1896 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 A0A0A0MRY4 1105 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 MEI4A8MW99 385 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 GIPC1O14908 333 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 KLRC4O43908 158 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 SYNCRIPO60506 623 aaKnown RBP8.15□□□□□ -1.1
VPS50-204ENST00000438395 OPHN1O60890 802 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 CILPO75339 1184 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 SYPP08247 313 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 HMBSP08397 361 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 GNSP15586 552 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 GABRG2P18507 467 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 ITPKAP23677 461 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 GTF2H1P32780 548 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 CHKAP35790 457 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 MXI1P50539 228 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 SIM1P81133 766 aaPredicted RBP8.15□□□□□ -1.1
VPS50-204ENST00000438395 COG7P83436 770 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 EFEMP1Q12805 493 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 ADAM9Q13443 819 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 ZNF394Q53GI3 561 aa8.15□□□□□ -1.1
VPS50-204ENST00000438395 WDR45BQ5MNZ6 344 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms