RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 GABRB2P47870 512 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 CRYBB1P53674 252 aaPredicted RBP9.82□□□□□ -0.84
CUX1-206ENST00000437600 SLC6A3Q01959 620 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 SPARCL1Q14515 664 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 ITIH4Q14624 930 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 ZBTB6Q15916 424 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 DCAF6Q58WW2 860 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 MROH9Q5TGP6 573 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 OTOAQ7RTW8 1153 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 VSIG1Q86XK7 387 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 RFWD2Q8NHY2 731 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 CCHCR1Q8TD31 782 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 FNIP1Q8TF40 1166 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 PRR11Q96HE9 360 aaPredicted RBP9.82□□□□□ -0.84
CUX1-206ENST00000437600 MTG1Q9BT17 334 aaPredicted RBP9.82□□□□□ -0.84
CUX1-206ENST00000437600 TRPV6Q9H1D0 765 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 ACTR5Q9H9F9 607 aaPredicted RBP9.82□□□□□ -0.84
CUX1-206ENST00000437600 SLC24A3Q9HC58 644 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 MIOSQ9NXC5 875 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 SAGE1Q9NXZ1 904 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 MCM8Q9UJA3 840 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 SLC12A4Q9UP95 1085 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 INPP5FQ9Y2H2 1132 aa9.82□□□□□ -0.84
CUX1-206ENST00000437600 CCDC195A0A1B0GUA6 201 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 CCDC78A2IDD5 438 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 M0QZ92 97 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 PPP1R12AO14974 1030 aaPredicted RBP9.81□□□□□ -0.84
CUX1-206ENST00000437600 NEBLO76041 1014 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 OAS1P00973 400 aaKnown RBP9.81□□□□□ -0.84
CUX1-206ENST00000437600 CYP2F1P24903 491 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 TKTP29401 623 aaKnown RBP9.81□□□□□ -0.84
CUX1-206ENST00000437600 ACLYP53396 1101 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 PTK7Q13308 1070 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 NOMO1Q15155 1222 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 ACCSLQ4AC99 568 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 SYPL2Q5VXT5 272 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 CASC4Q6P4E1 433 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 KCNT2Q6UVM3 1135 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 ALKAL1Q6UXT8 129 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 RELL1Q8IUW5 271 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 ATP11CQ8NB49 1132 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 PXYLP1Q8TE99 480 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 DCAKDQ8WVC6 231 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 MIEF2Q96C03 454 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 KCNK16Q96T55 309 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 TACO1Q9BSH4 297 aaKnown RBP9.81□□□□□ -0.84
CUX1-206ENST00000437600 CYP3A43Q9HB55 503 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 SMYD2Q9NRG4 433 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 UBQLN1Q9UMX0 589 aaKnown RBP9.81□□□□□ -0.84
CUX1-206ENST00000437600 CHKBQ9Y259 395 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 USP12O75317 370 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 POMCP01189 267 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 MT-ND3P03897 115 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 AMHP03971 560 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 CDC25CP30307 473 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 PGGT1BP53609 377 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 MRPS6P82932 125 aaKnown RBP9.81□□□□□ -0.84
CUX1-206ENST00000437600 INCA1Q0VD86 236 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 XRCC4Q13426 336 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 CCSAPQ6IQ19 270 aaPredicted RBP9.81□□□□□ -0.84
CUX1-206ENST00000437600 HFE2Q6ZVN8 426 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 MTDHQ86UE4 582 aaKnown RBP9.81□□□□□ -0.84
CUX1-206ENST00000437600 SPNS2Q8IVW8 549 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 TTC13Q8NBP0 860 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 SLAIN1Q8ND83 568 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 KLHDC9Q8NEP7 349 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 KBTBD7Q8WVZ9 684 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 AGAP3Q96P47 875 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 TBCBQ99426 244 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 RHOBTB2Q9BYZ6 727 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.81□□□□□ -0.844e-7■■■■■ 40.8
CUX1-206ENST00000437600 VRTNQ9H8Y1 702 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 CNTN3Q9P232 1028 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 MARCOQ9UEW3 520 aaPredicted RBP9.81□□□□□ -0.84
CUX1-206ENST00000437600 PRKAG3Q9UGI9 489 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 NOD1Q9Y239 953 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 IKBKGQ9Y6K9 419 aa9.81□□□□□ -0.84
CUX1-206ENST00000437600 F8W810 466 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 GNAT1P11488 350 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 PAX7P23759 505 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 GBP2P32456 591 aaPredicted RBP9.8□□□□□ -0.84
CUX1-206ENST00000437600 SCNN1GP51170 649 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 LILRA4P59901 499 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 SNCBQ16143 134 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 WSCD1Q658N2 575 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 PPP1R2P3Q6NXS1 205 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 DENND5BQ6ZUT9 1274 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 RNF180Q86T96 592 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 CAND1Q86VP6 1230 aaKnown RBP9.8□□□□□ -0.84
CUX1-206ENST00000437600 HACE1Q8IYU2 909 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 CCNYQ8ND76 341 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 DEPDC1BQ8WUY9 529 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 TTC25Q96NG3 672 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 PLEKHA5Q9HAU0 1116 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 PLAC1Q9HBJ0 212 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 ZC3H7BQ9UGR2 993 aaKnown RBP9.8□□□□□ -0.84
CUX1-206ENST00000437600 Q9Y3F1 56 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 PDE4DIPQ5VU43 2346 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 KCNK1O00180 336 aa9.8□□□□□ -0.84
CUX1-206ENST00000437600 APOL1O14791 398 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms