RNA–Protein interactions for RNA: ENST00000431533.6

RPL28-204, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-204ENST00000431533 MIB1Q86YT6 1006 aa16.09■□□□□ 0.17
RPL28-204ENST00000431533 TFAP2BQ92481 460 aa16.09■□□□□ 0.17
RPL28-204ENST00000431533 NDRG1Q92597 394 aaKnown RBP16.09■□□□□ 0.17
RPL28-204ENST00000431533 KREMEN1Q96MU8 473 aa16.09■□□□□ 0.17
RPL28-204ENST00000431533 SCNM1Q9BWG6 230 aa16.09■□□□□ 0.17
RPL28-204ENST00000431533 KLF16Q9BXK1 252 aaPredicted RBP16.09■□□□□ 0.17
RPL28-204ENST00000431533 UBE2TQ9NPD8 197 aaPredicted RBP16.09■□□□□ 0.17
RPL28-204ENST00000431533 DACH1Q9UI36 760 aa16.09■□□□□ 0.17
RPL28-204ENST00000431533 LSM7Q9UK45 103 aaKnown RBP16.09■□□□□ 0.17
RPL28-204ENST00000431533 PILRBQ9UKJ0 227 aa16.09■□□□□ 0.17
RPL28-204ENST00000431533 NEUROG3Q9Y4Z2 214 aa16.09■□□□□ 0.17
RPL28-204ENST00000431533 USP3Q9Y6I4 520 aa16.09■□□□□ 0.17
RPL28-204ENST00000431533 GOLGA6L22H0YM25 854 aa16.08■□□□□ 0.16
RPL28-204ENST00000431533 OPHN1O60890 802 aa16.08■□□□□ 0.16
RPL28-204ENST00000431533 TULP3O75386 442 aa16.08■□□□□ 0.16
RPL28-204ENST00000431533 SYPP08247 313 aa16.08■□□□□ 0.16
RPL28-204ENST00000431533 PAEPP09466 180 aa16.08■□□□□ 0.16
RPL28-204ENST00000431533 LCP1P13796 627 aa16.08■□□□□ 0.16
RPL28-204ENST00000431533 HOXB2P14652 356 aa16.08■□□□□ 0.16
RPL28-204ENST00000431533 HNRNPLP14866 589 aaKnown RBP eCLIP16.08■□□□□ 0.16
RPL28-204ENST00000431533 NTSR1P30989 418 aa16.08■□□□□ 0.16
RPL28-204ENST00000431533 PTGER3P43115 390 aa16.08■□□□□ 0.16
RPL28-204ENST00000431533 YWHAGP61981 247 aaKnown RBP eCLIP16.08■□□□□ 0.16
RPL28-204ENST00000431533 GCNT1Q02742 428 aa16.08■□□□□ 0.16
RPL28-204ENST00000431533 EMC10Q5UCC4 262 aa16.08■□□□□ 0.16
RPL28-204ENST00000431533 PEAR1Q5VY43 1037 aaPredicted RBP16.08■□□□□ 0.16
RPL28-204ENST00000431533 GRAMD4Q6IC98 578 aa16.08■□□□□ 0.16
RPL28-204ENST00000431533 GJB7Q6PEY0 223 aa16.08■□□□□ 0.16
RPL28-204ENST00000431533 RSRC2Q7L4I2 434 aaKnown RBP16.08■□□□□ 0.16
RPL28-204ENST00000431533 TADA2BQ86TJ2 420 aa16.08■□□□□ 0.16
RPL28-204ENST00000431533 C12orf40Q86WS4 652 aa16.08■□□□□ 0.16
RPL28-204ENST00000431533 IRF2BP1Q8IU81 584 aa16.08■□□□□ 0.16
RPL28-204ENST00000431533 SIX6OS1Q8N1H7 587 aa16.08■□□□□ 0.16
RPL28-204ENST00000431533 NAT16Q8N8M0 369 aa16.08■□□□□ 0.16
RPL28-204ENST00000431533 GPT2Q8TD30 523 aa16.08■□□□□ 0.16
RPL28-204ENST00000431533 IPO9Q96P70 1041 aaKnown RBP16.08■□□□□ 0.16
RPL28-204ENST00000431533 SPHK2Q9NRA0 654 aa16.08■□□□□ 0.16
RPL28-204ENST00000431533 WDR35Q9P2L0 1181 aa16.08■□□□□ 0.16
RPL28-204ENST00000431533 DNMT3LQ9UJW3 386 aa16.08■□□□□ 0.16
RPL28-204ENST00000431533 KIAA1257Q9ULG3 409 aa16.08■□□□□ 0.16
RPL28-204ENST00000431533 STARD13Q9Y3M8 1113 aa16.08■□□□□ 0.16
RPL28-204ENST00000431533 PES1O00541 588 aaKnown RBP16.07■□□□□ 0.16
RPL28-204ENST00000431533 ADAM23O75077 832 aa16.07■□□□□ 0.16
RPL28-204ENST00000431533 ZBED1O96006 694 aa16.07■□□□□ 0.16
RPL28-204ENST00000431533 SERPINF2P08697 491 aa16.07■□□□□ 0.16
RPL28-204ENST00000431533 SETSIPP0DME0 302 aa16.07■□□□□ 0.16
RPL28-204ENST00000431533 SLC9A1P19634 815 aa16.07■□□□□ 0.16
RPL28-204ENST00000431533 USP8P40818 1118 aa16.07■□□□□ 0.16
RPL28-204ENST00000431533 APBA1Q02410 837 aa16.07■□□□□ 0.16
RPL28-204ENST00000431533 E2F5Q15329 346 aa16.07■□□□□ 0.16
RPL28-204ENST00000431533 ARHGAP44Q17R89 818 aa16.07■□□□□ 0.16
RPL28-204ENST00000431533 RAB41Q5JT25 222 aa16.07■□□□□ 0.16
RPL28-204ENST00000431533 C10orf76Q5T2E6 689 aa16.07■□□□□ 0.16
RPL28-204ENST00000431533 GBP6Q6ZN66 633 aa16.07■□□□□ 0.16
RPL28-204ENST00000431533 FAM114A1Q8IWE2 563 aa16.07■□□□□ 0.16
RPL28-204ENST00000431533 ARHGAP18Q8N392 663 aa16.07■□□□□ 0.16
RPL28-204ENST00000431533 TERB1Q8NA31 727 aa16.07■□□□□ 0.16
RPL28-204ENST00000431533 ZSWIM1Q9BR11 485 aa16.07■□□□□ 0.16
RPL28-204ENST00000431533 UBXN6Q9BZV1 441 aa16.07■□□□□ 0.16
RPL28-204ENST00000431533 THAP9Q9H5L6 903 aa16.07■□□□□ 0.16
RPL28-204ENST00000431533 TMEM74BQ9NUR3 256 aa16.07■□□□□ 0.16
RPL28-204ENST00000431533 SUSD2Q9UGT4 822 aa16.07■□□□□ 0.16
RPL28-204ENST00000431533 MBD1Q9UIS9 605 aaPredicted RBP16.07■□□□□ 0.16
RPL28-204ENST00000431533 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.07■□□□□ 0.16
RPL28-204ENST00000431533 WASF3Q9UPY6 502 aa16.07■□□□□ 0.16
RPL28-204ENST00000431533 CACNA1GO43497 2377 aa16.06■□□□□ 0.16
RPL28-204ENST00000431533 ANTXRLA6NF34 631 aa16.06■□□□□ 0.16
RPL28-204ENST00000431533 PRKCSHP14314 528 aaPredicted RBP16.06■□□□□ 0.16
RPL28-204ENST00000431533 ITPKAP23677 461 aa16.06■□□□□ 0.16
RPL28-204ENST00000431533 PLA2G4AP47712 749 aa16.06■□□□□ 0.16
RPL28-204ENST00000431533 SIM1P81133 766 aaPredicted RBP16.06■□□□□ 0.16
RPL28-204ENST00000431533 ZNF33AQ06730 810 aa16.06■□□□□ 0.16
RPL28-204ENST00000431533 SEMA3BQ13214 749 aa16.06■□□□□ 0.16
RPL28-204ENST00000431533 SYCP2LQ5T4T6 812 aa16.06■□□□□ 0.16
RPL28-204ENST00000431533 TRIM65Q6PJ69 517 aa16.06■□□□□ 0.16
RPL28-204ENST00000431533 LCLAT1Q6UWP7 414 aa16.06■□□□□ 0.16
RPL28-204ENST00000431533 TPGS1Q6ZTW0 290 aa16.06■□□□□ 0.16
RPL28-204ENST00000431533 TMEM25Q86YD3 366 aa16.06■□□□□ 0.16
RPL28-204ENST00000431533 SFTPA1Q8IWL2 248 aa16.06■□□□□ 0.16
RPL28-204ENST00000431533 ETFBKMTQ8IXQ9 262 aa16.06■□□□□ 0.16
RPL28-204ENST00000431533 BHMTQ93088 406 aa16.06■□□□□ 0.16
RPL28-204ENST00000431533 GTPBP2Q9BX10 602 aaKnown RBP16.06■□□□□ 0.16
RPL28-204ENST00000431533 CLIC5Q9NZA1 410 aa16.06■□□□□ 0.16
RPL28-204ENST00000431533 MSRB2Q9Y3D2 182 aa16.06■□□□□ 0.16
RPL28-204ENST00000431533 ASCC3Q8N3C0 2202 aaKnown RBP16.06■□□□□ 0.16
RPL28-204ENST00000431533 PI4KAP42356 2102 aa16.06■□□□□ 0.16
RPL28-204ENST00000431533 PLXND1Q9Y4D7 1925 aa16.06■□□□□ 0.16
RPL28-204ENST00000431533 SLC12A8A0AV02 714 aa16.05■□□□□ 0.16
RPL28-204ENST00000431533 NDUFS2O75306 463 aa16.05■□□□□ 0.16
RPL28-204ENST00000431533 STC2O76061 302 aa16.05■□□□□ 0.16
RPL28-204ENST00000431533 GNSP15586 552 aa16.05■□□□□ 0.16
RPL28-204ENST00000431533 SPINK2P20155 84 aa16.05■□□□□ 0.16
RPL28-204ENST00000431533 ZNF132P52740 706 aa16.05■□□□□ 0.16
RPL28-204ENST00000431533 MFAP3P55082 362 aa16.05■□□□□ 0.16
RPL28-204ENST00000431533 MESP2Q0VG99 397 aa16.05■□□□□ 0.16
RPL28-204ENST00000431533 STILQ15468 1287 aa16.05■□□□□ 0.16
RPL28-204ENST00000431533 CNGA2Q16280 664 aa16.05■□□□□ 0.16
RPL28-204ENST00000431533 MAN2A1Q16706 1144 aa16.05■□□□□ 0.16
RPL28-204ENST00000431533 EXOC3L4Q17RC7 722 aa16.05■□□□□ 0.16
RPL28-204ENST00000431533 KLHDC10Q6PID8 442 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms