RNA–Protein interactions for RNA: ENST00000423965.2

CLCN3P1-201, Transcript of chloride voltage-gated channel 3 pseudogene 1, humanhuman

BASIC

Gene CLCN3P1, Length 1,017 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P1-201ENST00000423965 DCP1BQ8IZD4 617 aaKnown RBP8.43□□□□□ -1.06
CLCN3P1-201ENST00000423965 SAP25Q8TEE9 199 aa8.43□□□□□ -1.06
CLCN3P1-201ENST00000423965 HAS1Q92839 578 aa8.43□□□□□ -1.06
CLCN3P1-201ENST00000423965 OTUB2Q96DC9 234 aa8.43□□□□□ -1.06
CLCN3P1-201ENST00000423965 VCPIP1Q96JH7 1222 aa8.43□□□□□ -1.06
CLCN3P1-201ENST00000423965 SENP8Q96LD8 212 aa8.43□□□□□ -1.06
CLCN3P1-201ENST00000423965 DRC1Q96MC2 740 aa8.43□□□□□ -1.06
CLCN3P1-201ENST00000423965 CCNL2Q96S94 520 aaPredicted RBP8.43□□□□□ -1.06
CLCN3P1-201ENST00000423965 ACO2Q99798 780 aaKnown RBP8.43□□□□□ -1.06
CLCN3P1-201ENST00000423965 EIF2AK1Q9BQI3 630 aaKnown RBP8.43□□□□□ -1.06
CLCN3P1-201ENST00000423965 SLC25A18Q9H1K4 315 aa8.43□□□□□ -1.06
CLCN3P1-201ENST00000423965 RPF1Q9H9Y2 349 aaKnown RBP8.43□□□□□ -1.06
CLCN3P1-201ENST00000423965 TM9SF3Q9HD45 589 aa8.43□□□□□ -1.06
CLCN3P1-201ENST00000423965 ABI2Q9NYB9 513 aaPredicted RBP8.43□□□□□ -1.06
CLCN3P1-201ENST00000423965 NOP53Q9NZM5 478 aaKnown RBP8.43□□□□□ -1.06
CLCN3P1-201ENST00000423965 TUBGCP4Q9UGJ1 667 aa8.43□□□□□ -1.06
CLCN3P1-201ENST00000423965 PCDHB5Q9Y5E4 795 aa8.43□□□□□ -1.06
CLCN3P1-201ENST00000423965 RBM8AQ9Y5S9 174 aaKnown RBP8.43□□□□□ -1.06
CLCN3P1-201ENST00000423965 ARID1BQ8NFD5 2236 aaPredicted RBP8.43□□□□□ -1.06
CLCN3P1-201ENST00000423965 CITO14578 2027 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 NAV3Q8IVL0 2385 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 OTOGQ6ZRI0 2925 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 C2orf78A6NCI8 922 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 KCNJ18B7U540 433 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 HOXC11O43248 304 aaPredicted RBP8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 XPOTO43592 962 aaKnown RBP8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 TULP3O75386 442 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 PRPF40AO75400 957 aaKnown RBP8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 ALBP02768 609 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 GCFC2P16383 781 aaKnown RBP8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 ABCB4P21439 1286 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 ACP1P24666 158 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 SCNN1AP37088 669 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 SLC7A9P82251 487 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 IL9RQ01113 521 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 HDAC1Q13547 482 aaPredicted RBP8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 NFE2Q16621 373 aaPredicted RBP8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 ZNF568Q3ZCX4 644 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 LY6G5CQ5SRR4 150 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 EGFLAMQ63HQ2 1017 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 C8orf86Q6ZUL3 223 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 KANSL1Q7Z3B3 1105 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 METTL23Q86XA0 190 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 GATAD2AQ86YP4 633 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 EID2Q8N6I1 236 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 PIGOQ8TEQ8 1089 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 BSNDQ8WZ55 320 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 SKA1Q96BD8 255 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 IFT74Q96LB3 600 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 TSPAN18Q96SJ8 248 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 ACOX2Q99424 681 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 ELF4Q99607 663 aaPredicted RBP8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 SLC6A17Q9H1V8 727 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 FAM13BQ9NYF5 915 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 ZFATQ9P243 1243 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 STIM2Q9P246 746 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 RCAN3Q9UKA8 241 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 UBQLN1Q9UMX0 589 aaKnown RBP8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 PCDHA4Q9UN74 947 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 PCDHB1Q9Y5F3 818 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 OBSL1O75147 1896 aa8.42□□□□□ -1.06
CLCN3P1-201ENST00000423965 TMEM131Q92545 1883 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 VILLO15195 856 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 BAG4O95429 457 aaKnown RBP8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 GJB6O95452 261 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 FAM87AP0C7U9 286 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 CYP11B2P19099 503 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 PROZP22891 400 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 CD27P26842 260 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 COL8A1P27658 744 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 RBMS1P29558 406 aaKnown RBP8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 HNRNPUQ00839 825 aaKnown RBP eCLIP8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 STARD3Q14849 445 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 NCAPHQ15003 741 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 IGFBP7Q16270 282 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 CDCP2Q5VXM1 449 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 USP53Q70EK8 1073 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 ADAT2Q7Z6V5 191 aaKnown RBP8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 DDX42Q86XP3 938 aaKnown RBP eCLIP8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 TMPRSS6Q8IU80 811 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 NAT16Q8N8M0 369 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 NSUN7Q8NE18 718 aaKnown RBP8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 NUDT8Q8WV74 236 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 EXTL1Q92935 676 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 SGF29Q96ES7 293 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 SIPA1Q96FS4 1042 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 SLC46A1Q96NT5 459 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 DEPDC7Q96QD5 511 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 NAP1L4Q99733 375 aaKnown RBP8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 TCHPQ9BT92 498 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 MRPL4Q9BYD3 311 aaKnown RBP8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 EPN3Q9H201 632 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 ZNF768Q9H5H4 540 aaKnown RBP8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 ABCB6Q9NP58 842 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 GEMIN8Q9NWZ8 242 aaKnown RBP8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 VPS54Q9P1Q0 977 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 RAD54BQ9Y620 910 aa8.41□□□□□ -1.06
CLCN3P1-201ENST00000423965 MTORP42345 2549 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms