RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 C22orf34Q6ZV56 151 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 UBALD2Q8IYN6 164 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 PDCL2Q8N4E4 241 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 LRRN4CLQ8ND94 238 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 ENGASEQ8NFI3 743 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 ITFG1Q8TB96 612 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 PLEKHO2Q8TD55 490 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 TMEM174Q8WUU8 243 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 ASIC4Q96FT7 647 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 CCDC34Q96HJ3 373 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 FNBP1Q96RU3 617 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 CGRRF1Q99675 332 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 SPATA9Q9BWV2 254 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 ZCWPW1Q9H0M4 648 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 KCNK12Q9HB15 430 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 DMAC2Q9NW81 257 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 CEP72Q9P209 647 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 IGSF9Q9P2J2 1179 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 CDH7Q9ULB5 785 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 MRPS23Q9Y3D9 190 aaKnown RBP7.41□□□□□ -1.22
HMGN1-205ENST00000419378 ZFP37Q9Y6Q3 630 aaPredicted RBP7.41□□□□□ -1.22
HMGN1-205ENST00000419378 MUC6Q6W4X9 2439 aa7.41□□□□□ -1.22
HMGN1-205ENST00000419378 ZNF318Q5VUA4 2279 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 ANHXE9PGG2 379 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 AGRPO00253 132 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 DYRK3O43781 588 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 HUS1O60921 280 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 KIF20AO95235 890 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 NR3C1P04150 777 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 CEBPBP17676 345 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 PTPN2P17706 415 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 TNNI1P19237 187 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 CASP4P49662 377 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 MYO1EQ12965 1108 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 DUSP4Q13115 394 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 PLD1Q13393 1074 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 TDGQ13569 410 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 HTR4Q13639 388 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 PRSS36Q5K4E3 855 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 PDZD4Q76G19 769 aaPredicted RBP7.4□□□□□ -1.22
HMGN1-205ENST00000419378 TRAPPC11Q7Z392 1133 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 OSTM1Q86WC4 334 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 ADGRF2Q8IZF7 708 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 THEM5Q8N1Q8 247 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 TMEM86AQ8N2M4 240 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 ELMOD1Q8N336 334 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 GUF1Q8N442 669 aaKnown RBP7.4□□□□□ -1.22
HMGN1-205ENST00000419378 TTC9BQ8N6N2 239 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 ATAD1Q8NBU5 361 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 RSAD2Q8WXG1 361 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 ING5Q8WYH8 240 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 FGF13Q92913 245 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 HPDLQ96IR7 371 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 GDAP2Q9NXN4 497 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 DDX43Q9NXZ2 648 aaKnown RBP7.4□□□□□ -1.22
HMGN1-205ENST00000419378 HSFX1Q9UBD0 423 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 RAPGEFL1Q9UHV5 662 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 DUSP12Q9UNI6 340 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 TRAF3IP3Q9Y228 551 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 SNX9Q9Y5X1 595 aa7.4□□□□□ -1.22
HMGN1-205ENST00000419378 A0A1W2PQU0 124 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 SHISA3A0PJX4 238 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 LRRIQ3A6PVS8 624 aaPredicted RBP7.39□□□□□ -1.23
HMGN1-205ENST00000419378 HCRTO43612 131 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 NARSO43776 548 aaKnown RBP7.39□□□□□ -1.23
HMGN1-205ENST00000419378 CALUO43852 315 aaPredicted RBP7.39□□□□□ -1.23
HMGN1-205ENST00000419378 SOAT2O75908 522 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 ITGAVP06756 1048 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 ATF6P18850 670 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 ACAT1P24752 427 aaKnown RBP7.39□□□□□ -1.23
HMGN1-205ENST00000419378 ANP32AP39687 249 aaKnown RBP7.39□□□□□ -1.23
HMGN1-205ENST00000419378 CCR2P41597 374 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 ALDH1A3P47895 512 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 CDR1P51861 262 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 EPHA5P54756 1037 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 DLG4P78352 724 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 MYL7Q01449 175 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 TSPY1Q01534 308 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 SMARCB1Q12824 385 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 PPP2R5DQ14738 602 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 NFIL3Q16649 462 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 CCDC142Q17RM4 750 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 NKPD1Q17RQ9 610 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 SOWAHAQ2M3V2 549 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 MGAT5BQ3V5L5 792 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 ZCWPW2Q504Y3 356 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 C2orf27AQ580R0 203 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 CDKAL1Q5VV42 579 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 IQCEQ6IPM2 695 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 LIMS2Q7Z4I7 341 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 BMP8AQ7Z5Y6 402 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 LRRTM3Q86VH5 581 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 ZNF227Q86WZ6 799 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 TMC8Q8IU68 726 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 ZDHHC13Q8IUH4 622 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 DCP1BQ8IZD4 617 aaKnown RBP7.39□□□□□ -1.23
HMGN1-205ENST00000419378 SLC44A3Q8N4M1 653 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 LEMD2Q8NC56 503 aa7.39□□□□□ -1.23
HMGN1-205ENST00000419378 PIWIL2Q8TC59 973 aaKnown RBP7.39□□□□□ -1.23
HMGN1-205ENST00000419378 SPATA18Q8TC71 538 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms