RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 KRCC1Q9NPI7 259 aaPredicted RBP25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 USP20Q9Y2K6 914 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 POLR2EP19388 210 aaKnown RBP25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 RHBDL3P58872 404 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 RD3Q7Z3Z2 195 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 DTX3LQ8TDB6 740 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 SEC16BQ96JE7 1060 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 TRHDEQ9UKU6 1024 aa25.74■■□□□ 1.71
SPIRE1-202ENST00000409402 ILF2Q12905 390 aaKnown RBP25.73■■□□□ 1.71
SPIRE1-202ENST00000409402 RPAINQ86UA6 219 aa25.73■■□□□ 1.71
SPIRE1-202ENST00000409402 CAMKK2Q96RR4 588 aa25.73■■□□□ 1.71
SPIRE1-202ENST00000409402 MFSD1Q9H3U5 465 aa25.73■■□□□ 1.71
SPIRE1-202ENST00000409402 ABCC13Q9NSE7 274 aa25.73■■□□□ 1.71
SPIRE1-202ENST00000409402 CAPN6Q9Y6Q1 641 aa25.73■■□□□ 1.71
SPIRE1-202ENST00000409402 ACOX1Q15067 660 aa25.73■■□□□ 1.71
SPIRE1-202ENST00000409402 ATP5BP06576 529 aaKnown RBP25.73■■□□□ 1.71
SPIRE1-202ENST00000409402 CYP2A7P20853 494 aa25.73■■□□□ 1.71
SPIRE1-202ENST00000409402 PALB2Q86YC2 1186 aa25.73■■□□□ 1.71
SPIRE1-202ENST00000409402 KRT78Q8N1N4 520 aa25.73■■□□□ 1.71
SPIRE1-202ENST00000409402 ACTL9Q8TC94 416 aa25.73■■□□□ 1.71
SPIRE1-202ENST00000409402 TMEM159Q96B96 161 aa25.73■■□□□ 1.71
SPIRE1-202ENST00000409402 GANQ9H2C0 597 aa25.73■■□□□ 1.71
SPIRE1-202ENST00000409402 NR2C2P49116 596 aa25.73■■□□□ 1.71
SPIRE1-202ENST00000409402 EARS2Q5JPH6 523 aaKnown RBP25.73■■□□□ 1.71
SPIRE1-202ENST00000409402 SLC26A11Q86WA9 606 aa25.73■■□□□ 1.71
SPIRE1-202ENST00000409402 OSBPL1AQ9BXW6 950 aa25.73■■□□□ 1.71
SPIRE1-202ENST00000409402 PDZK1P1A8MUH7 402 aa25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 SPTLC1O15269 473 aa25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 MGAT5Q09328 741 aa25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 DIS3LQ8TF46 1054 aaKnown RBP25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 NSL1Q96IY1 281 aa25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 CYP4F12Q9HCS2 524 aa25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 FBXO10Q9UK96 956 aa25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 DUSP10Q9Y6W6 482 aa25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 MAP2P11137 1827 aaKnown RBP25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 HMGCRP04035 888 aa25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 USP17L7P0C7H9 530 aa25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 CSHL1Q14406 222 aa25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 MTSS1LQ765P7 747 aa25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 TRPM8Q7Z2W7 1104 aa25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 GNG14A0A1W2PPG7 69 aa25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 LTFP02788 710 aa25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 CASP10Q92851 521 aa25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 C1QTNF7Q9BXJ2 289 aa25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 PRKD2Q9BZL6 878 aa25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 SLC9A3R1O14745 358 aaPredicted RBP25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 FGFR1P11362 822 aa25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 POU6F1Q14863 301 aa25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 PAFAH2Q99487 392 aa25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 CCDC134Q9H6E4 229 aa25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 FAM47E-STBD1D6RA91 191 aa25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 SERPINB10P48595 397 aa25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 ZNF135P52742 658 aaPredicted RBP25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 BCL2L1Q07817 233 aa25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 ELOVL6Q9H5J4 265 aa25.72■■□□□ 1.71
SPIRE1-202ENST00000409402 SF3B1O75533 1304 aaKnown RBP eCLIP25.71■■□□□ 1.713e-6■■■■■ 127.6
SPIRE1-202ENST00000409402 COPAP53621 1224 aa25.71■■□□□ 1.71
SPIRE1-202ENST00000409402 PCDH9Q9HC56 1237 aa25.71■■□□□ 1.71
SPIRE1-202ENST00000409402 RARGP13631 454 aa25.71■■□□□ 1.71
SPIRE1-202ENST00000409402 HPGDP15428 266 aa25.71■■□□□ 1.71
SPIRE1-202ENST00000409402 ZNF7P17097 686 aaPredicted RBP25.71■■□□□ 1.71
SPIRE1-202ENST00000409402 OTOAQ7RTW8 1153 aa25.71■■□□□ 1.71
SPIRE1-202ENST00000409402 ADAM32Q8TC27 787 aa25.71■■□□□ 1.71
SPIRE1-202ENST00000409402 IL17RAQ96F46 866 aa25.71■■□□□ 1.71
SPIRE1-202ENST00000409402 UBA2Q9UBT2 640 aaPredicted RBP25.71■■□□□ 1.71
SPIRE1-202ENST00000409402 ANKRD63C9JTQ0 380 aa25.71■■□□□ 1.71
SPIRE1-202ENST00000409402 TM4SF1P30408 202 aa25.71■■□□□ 1.71
SPIRE1-202ENST00000409402 PMS1P54277 932 aaKnown RBP25.71■■□□□ 1.71
SPIRE1-202ENST00000409402 REXO1L1PQ8IX06 675 aa25.71■■□□□ 1.71
SPIRE1-202ENST00000409402 TRPM4Q8TD43 1214 aa25.71■■□□□ 1.71
SPIRE1-202ENST00000409402 HTR3CQ8WXA8 447 aa25.71■■□□□ 1.71
SPIRE1-202ENST00000409402 IGF2BP3O00425 579 aaKnown RBP eCLIP25.71■■□□□ 1.71
SPIRE1-202ENST00000409402 SUSD6Q92537 303 aa25.71■■□□□ 1.71
SPIRE1-202ENST00000409402 ARHGAP20Q9P2F6 1191 aa25.71■■□□□ 1.71
SPIRE1-202ENST00000409402 PSMD12O00232 456 aaPredicted RBP25.7■■□□□ 1.71
SPIRE1-202ENST00000409402 O00370 1275 aa25.7■■□□□ 1.71
SPIRE1-202ENST00000409402 TPBGLP0DKB5 382 aa25.7■■□□□ 1.71
SPIRE1-202ENST00000409402 EIF4BP23588 611 aaKnown RBP25.7■■□□□ 1.71
SPIRE1-202ENST00000409402 CTNNB1P35222 781 aa25.7■■□□□ 1.71
SPIRE1-202ENST00000409402 TNFSF13BQ9Y275 285 aa25.7■■□□□ 1.71
SPIRE1-202ENST00000409402 SALL3Q9BXA9 1300 aa25.7■■□□□ 1.71
SPIRE1-202ENST00000409402 YBX3P16989 372 aaKnown RBP eCLIP25.7■■□□□ 1.715e-6■■■□□ 19.1
SPIRE1-202ENST00000409402 LSP1P33241 339 aa25.7■■□□□ 1.71
SPIRE1-202ENST00000409402 MAPK9P45984 424 aa25.7■■□□□ 1.71
SPIRE1-202ENST00000409402 POLR2LP62875 67 aaKnown RBP25.7■■□□□ 1.71
SPIRE1-202ENST00000409402 ACTN3Q08043 901 aaPredicted RBP25.7■■□□□ 1.71
SPIRE1-202ENST00000409402 DNAJC3Q13217 504 aa25.7■■□□□ 1.71
SPIRE1-202ENST00000409402 PGS1Q32NB8 556 aa25.7■■□□□ 1.71
SPIRE1-202ENST00000409402 CBWD3Q5JTY5 395 aa25.7■■□□□ 1.71
SPIRE1-202ENST00000409402 CBWD5Q5RIA9 395 aa25.7■■□□□ 1.71
SPIRE1-202ENST00000409402 UNC93AQ86WB7 457 aa25.7■■□□□ 1.71
SPIRE1-202ENST00000409402 SLC22A9Q8IVM8 553 aa25.7■■□□□ 1.71
SPIRE1-202ENST00000409402 TMCO5AQ8N6Q1 288 aa25.7■■□□□ 1.71
SPIRE1-202ENST00000409402 SERAC1Q96JX3 654 aa25.7■■□□□ 1.71
SPIRE1-202ENST00000409402 V9GYQ6 96 aa25.7■■□□□ 1.71
SPIRE1-202ENST00000409402 PRKAR2AP13861 404 aaKnown RBP25.7■■□□□ 1.7
SPIRE1-202ENST00000409402 ATP5C1P36542 298 aaKnown RBP25.7■■□□□ 1.7
SPIRE1-202ENST00000409402 CYP51A1Q16850 503 aa25.7■■□□□ 1.7
SPIRE1-202ENST00000409402 FIBCD1Q8N539 461 aa25.7■■□□□ 1.7
SPIRE1-202ENST00000409402 CERS5Q8N5B7 392 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms