RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 ADRA1DP25100 572 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 ZNF143P52747 638 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-205ENST00000397611 CACNB3P54284 484 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 ACTR2P61160 394 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 CDC42EP1Q00587 391 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 STXBP2Q15833 593 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 CDO1Q16878 200 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 POTEAQ6S8J7 498 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 C16orf89Q6UX73 402 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 CCDC80Q76M96 950 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 CYP4X1Q8N118 509 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 TTLL6Q8N841 843 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 NCLNQ969V3 563 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 E2F7Q96AV8 911 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 ATXN7L3BQ96GX2 97 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 COQ7Q99807 217 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 FAM213AQ9BRX8 229 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 CLIC5Q9NZA1 410 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 DNPEPQ9ULA0 475 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 MYH1P12882 1939 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 LTBP3Q9NS15 1303 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 CCDC189A1A4V9 331 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 VDRP11473 427 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 GLRA2P23416 452 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 ACAT1P24752 427 aaKnown RBP5.62□□□□□ -1.51
PTPRD-205ENST00000397611 PRDX6P30041 224 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 RPL22P35268 128 aaKnown RBP5.62□□□□□ -1.51
PTPRD-205ENST00000397611 HSPA13P48723 471 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 MAPK10P53779 464 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 BACE1P56817 501 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 TAS2R40P59535 323 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 JAG1P78504 1218 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 SH3D19Q5HYK7 790 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 TMC5Q6UXY8 1006 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 UNC93AQ86WB7 457 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 PBXIP1Q96AQ6 731 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 SKA1Q96BD8 255 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 PAIP1Q9H074 479 aaKnown RBP5.62□□□□□ -1.51
PTPRD-205ENST00000397611 DDX43Q9NXZ2 648 aaKnown RBP5.62□□□□□ -1.51
PTPRD-205ENST00000397611 TEKT2Q9UIF3 430 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 RAD54BQ9Y620 910 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 IVNS1ABPQ9Y6Y0 642 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 E2F6O75461 281 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 SERPINI2O75830 405 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 TM7SF2O76062 418 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 TGM2P21980 687 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 ZNF200P98182 395 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-205ENST00000397611 B3GNT6Q6ZMB0 384 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 ALDH16A1Q8IZ83 802 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 NCSTNQ92542 709 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 FAM136AQ96C01 138 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 NMRK1Q9NWW6 199 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 ZBTB39O15060 712 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 TRIM16O95361 564 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 TNNC2P02585 160 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 SRGAP2CP0DJJ0 459 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 SRGAP2BP0DMP2 458 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 AOC1P19801 751 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 GABRB2P47870 512 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 GALK1P51570 392 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 PKN2Q16513 984 aaKnown RBP5.62□□□□□ -1.51
PTPRD-205ENST00000397611 C11orf91Q3C1V1 193 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 TDRD10Q5VZ19 366 aaKnown RBP5.62□□□□□ -1.51
PTPRD-205ENST00000397611 OR6B2Q6IFH4 312 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 ITFG2Q969R8 447 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 TEPSINQ96N21 525 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 SH3GL1Q99961 368 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 NOL6Q9H6R4 1146 aaKnown RBP5.62□□□□□ -1.51
PTPRD-205ENST00000397611 GSC2O15499 205 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 APOA1P02647 267 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 DLDP09622 509 aaKnown RBP5.62□□□□□ -1.51
PTPRD-205ENST00000397611 HOXC6P09630 235 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 KDELR1P24390 212 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 SERPINB10P48595 397 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 RAB27AP51159 221 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 NEK3P51956 506 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 AQP5P55064 265 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 MTTPP55157 894 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 FAM187BQ17R55 369 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 ANO4Q32M45 955 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 NOL9Q5SY16 702 aaKnown RBP5.62□□□□□ -1.51
PTPRD-205ENST00000397611 METTL7BQ6UX53 244 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 PLPPR4Q7Z2D5 763 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 CPXCR1Q8N123 301 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 ISL2Q96A47 359 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 BCO2Q9BYV7 579 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 FHDC1Q9C0D6 1143 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-205ENST00000397611 MTFR1LQ9H019 292 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 POLR3FQ9H1D9 316 aaPredicted RBP5.62□□□□□ -1.51
PTPRD-205ENST00000397611 BCAS3Q9H6U6 928 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 CISHQ9NSE2 258 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 PCSK1NQ9UHG2 260 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 RABGEF1Q9UJ41 708 aa5.62□□□□□ -1.51
PTPRD-205ENST00000397611 IQCA1LA6NCM1 817 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 H0YJX3 145 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 RTN3O95197 1032 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-205ENST00000397611 NR2C2P49116 596 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 NUDT2P50583 147 aa5.61□□□□□ -1.51
PTPRD-205ENST00000397611 PTPN11Q06124 597 aaPredicted RBP5.61□□□□□ -1.51
PTPRD-205ENST00000397611 BAATQ14032 418 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms