RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 GJA8P48165 433 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 CHN2P52757 468 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 EMP3P54852 163 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 YWHAEP62258 255 aaKnown RBP9.47□□□□□ -0.89
CAPN3-206ENST00000397163 RPL10AP62906 217 aaKnown RBP9.47□□□□□ -0.89
CAPN3-206ENST00000397163 CYLC2Q14093 348 aaPredicted RBP9.47□□□□□ -0.89
CAPN3-206ENST00000397163 NOMO1Q15155 1222 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 TCHHL1Q5QJ38 904 aaPredicted RBP9.47□□□□□ -0.89
CAPN3-206ENST00000397163 MAP3K21Q5TCX8 1036 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 C16orf46Q6P387 395 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 OLFML1Q6UWY5 402 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 ICA1LQ8NDH6 482 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 CMASQ8NFW8 434 aaPredicted RBP9.47□□□□□ -0.89
CAPN3-206ENST00000397163 PIWIL2Q8TC59 973 aaKnown RBP9.47□□□□□ -0.89
CAPN3-206ENST00000397163 JADE3Q92613 823 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 TRIM56Q9BRZ2 755 aaKnown RBP9.47□□□□□ -0.89
CAPN3-206ENST00000397163 TMEM39BQ9GZU3 492 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 KLC2Q9H0B6 622 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.47□□□□□ -0.89
CAPN3-206ENST00000397163 PTTG2Q9NZH5 202 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 NXF1Q9UBU9 619 aaKnown RBP9.47□□□□□ -0.89
CAPN3-206ENST00000397163 TBC1D30Q9Y2I9 924 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 AK5Q9Y6K8 562 aa9.47□□□□□ -0.89
CAPN3-206ENST00000397163 A0A1B0GTW7 788 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 CAPN8A6NHC0 703 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 TRDMT1O14717 391 aaKnown RBP9.46□□□□□ -0.89
CAPN3-206ENST00000397163 BIRC5O15392 142 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 ITM2AO43736 263 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 CCNT2O60583 730 aaKnown RBP9.46□□□□□ -0.89
CAPN3-206ENST00000397163 TRPA1O75762 1119 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 CAPN15O75808 1086 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 ZBED1O96006 694 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 SMIM18P0DKX4 95 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 COL6A2P12110 1019 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 PRKCHP24723 683 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 CCND2P30279 289 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 CDH5P33151 784 aaPredicted RBP9.46□□□□□ -0.89
CAPN3-206ENST00000397163 RGS2P41220 211 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 TNFSF9P41273 254 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 BAATQ14032 418 aaPredicted RBP9.46□□□□□ -0.89
CAPN3-206ENST00000397163 TRMT10BQ6PF06 316 aaKnown RBP9.46□□□□□ -0.89
CAPN3-206ENST00000397163 UNC5AQ6ZN44 842 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 ARCQ7LC44 396 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 DEFB107AQ8IZN7 70 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 ZFP28Q8NHY6 868 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 RAB3IL1Q8TBN0 382 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 FNIP1Q8TF40 1166 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 DEPDC1BQ8WUY9 529 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 JPH1Q9HDC5 661 aaPredicted RBP9.46□□□□□ -0.89
CAPN3-206ENST00000397163 ZNF70Q9UC06 446 aaPredicted RBP9.46□□□□□ -0.89
CAPN3-206ENST00000397163 CDH22Q9UJ99 828 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 PCDHGC3Q9UN70 934 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 SIN3BO75182 1162 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 TRUB2O95900 331 aaKnown RBP9.46□□□□□ -0.89
CAPN3-206ENST00000397163 CLPTM1O96005 669 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 NR3C2P08235 984 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 NCF2P19878 526 aaPredicted RBP9.46□□□□□ -0.89
CAPN3-206ENST00000397163 PAX3P23760 479 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 STT3AP46977 705 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 TGFB2P61812 414 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 XIAPP98170 497 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 TFAMQ00059 246 aaKnown RBP9.46□□□□□ -0.89
CAPN3-206ENST00000397163 ORC1Q13415 861 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 DGKZQ13574 1117 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 PEX6Q13608 980 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 TFDP2Q14188 446 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 MYLK3Q32MK0 819 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 ANKRD20A4Q4UJ75 823 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 TMEM110Q86TL2 294 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 ZBTB46Q86UZ6 589 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 LRRN4Q8WUT4 740 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 APBB2Q92870 758 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 DGCR14Q96DF8 476 aaKnown RBP9.46□□□□□ -0.89
CAPN3-206ENST00000397163 CNBD2Q96M20 576 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 CPXM1Q96SM3 734 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 BRD8Q9H0E9 1235 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 IFT122Q9HBG6 1241 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 NDUFA13Q9P0J0 144 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 CYTH4Q9UIA0 394 aa9.46□□□□□ -0.89
CAPN3-206ENST00000397163 FAF1Q9UNN5 650 aaPredicted RBP9.46□□□□□ -0.89
CAPN3-206ENST00000397163 SLX4Q8IY92 1834 aa9.46□□□□□ -0.9
CAPN3-206ENST00000397163 STAMBPO95630 424 aa9.46□□□□□ -0.9
CAPN3-206ENST00000397163 ASNSP08243 561 aa9.46□□□□□ -0.9
CAPN3-206ENST00000397163 ACTR2P61160 394 aa9.46□□□□□ -0.9
CAPN3-206ENST00000397163 NAA20P61599 178 aa9.46□□□□□ -0.9
CAPN3-206ENST00000397163 FOLH1Q04609 750 aa9.46□□□□□ -0.9
CAPN3-206ENST00000397163 DCTN2Q13561 401 aaKnown RBP9.46□□□□□ -0.9
CAPN3-206ENST00000397163 KRT81Q14533 505 aa9.46□□□□□ -0.9
CAPN3-206ENST00000397163 ZNF699Q32M78 642 aa9.46□□□□□ -0.9
CAPN3-206ENST00000397163 TMEM259Q4ZIN3 620 aa9.46□□□□□ -0.9
CAPN3-206ENST00000397163 XKR3Q5GH77 459 aa9.46□□□□□ -0.9
CAPN3-206ENST00000397163 GRAMD4Q6IC98 578 aa9.46□□□□□ -0.9
CAPN3-206ENST00000397163 CAND1Q86VP6 1230 aaKnown RBP9.46□□□□□ -0.9
CAPN3-206ENST00000397163 HPS6Q86YV9 775 aa9.46□□□□□ -0.9
CAPN3-206ENST00000397163 CCDC33Q8N5R6 958 aa9.46□□□□□ -0.9
CAPN3-206ENST00000397163 PPP4R1Q8TF05 950 aa9.46□□□□□ -0.9
CAPN3-206ENST00000397163 ABHD8Q96I13 439 aa9.46□□□□□ -0.9
CAPN3-206ENST00000397163 MRPL1Q9BYD6 325 aaKnown RBP9.46□□□□□ -0.9
CAPN3-206ENST00000397163 FRMD8Q9BZ67 464 aaPredicted RBP9.46□□□□□ -0.9
CAPN3-206ENST00000397163 SLC38A10Q9HBR0 1119 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms