RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 RNF26Q9BY78 433 aaPredicted RBP6.76□□□□□ -1.33
SNORA40.4-201ENST00000390971 HEMK1Q9Y5R4 338 aaPredicted RBP6.76□□□□□ -1.33
SNORA40.4-201ENST00000390971 PNMA6EA0A0J9YXQ4 647 aa6.75□□□□□ -1.33
SNORA40.4-201ENST00000390971 INO80B-WBP1J3KQ70 363 aa6.75□□□□□ -1.33
SNORA40.4-201ENST00000390971 SLC3A2P08195 630 aaKnown RBP6.75□□□□□ -1.33
SNORA40.4-201ENST00000390971 TACR3P29371 465 aa6.75□□□□□ -1.33
SNORA40.4-201ENST00000390971 PPM1AP35813 382 aa6.75□□□□□ -1.33
SNORA40.4-201ENST00000390971 ZNF81P51508 661 aa6.75□□□□□ -1.33
SNORA40.4-201ENST00000390971 CSHL1Q14406 222 aa6.75□□□□□ -1.33
SNORA40.4-201ENST00000390971 SEC23BQ15437 767 aa6.75□□□□□ -1.33
SNORA40.4-201ENST00000390971 TRIP6Q15654 476 aaKnown RBP6.75□□□□□ -1.33
SNORA40.4-201ENST00000390971 ACSM6Q6P461 480 aa6.75□□□□□ -1.33
SNORA40.4-201ENST00000390971 OR52L2PQ8NGH6 319 aa6.75□□□□□ -1.33
SNORA40.4-201ENST00000390971 PRSS3P2Q8NHM4 247 aa6.75□□□□□ -1.33
SNORA40.4-201ENST00000390971 SMG7Q92540 1137 aaKnown RBP6.75□□□□□ -1.33
SNORA40.4-201ENST00000390971 C1QTNF7Q9BXJ2 289 aa6.75□□□□□ -1.33
SNORA40.4-201ENST00000390971 ARL8BQ9NVJ2 186 aa6.75□□□□□ -1.33
SNORA40.4-201ENST00000390971 CCDC187A0A096LP49 1063 aa6.74□□□□□ -1.33
SNORA40.4-201ENST00000390971 J3KTA2 159 aa6.74□□□□□ -1.33
SNORA40.4-201ENST00000390971 CTIFO43310 598 aaKnown RBP6.74□□□□□ -1.33
SNORA40.4-201ENST00000390971 DHHO43323 396 aa6.74□□□□□ -1.33
SNORA40.4-201ENST00000390971 HSF1Q00613 529 aa6.74□□□□□ -1.33
SNORA40.4-201ENST00000390971 STARD3Q14849 445 aa6.74□□□□□ -1.33
SNORA40.4-201ENST00000390971 DENND1AQ8TEH3 1009 aa6.74□□□□□ -1.33
SNORA40.4-201ENST00000390971 CUL5Q93034 780 aa6.74□□□□□ -1.33
SNORA40.4-201ENST00000390971 TTLL2Q9BWV7 592 aa6.74□□□□□ -1.33
SNORA40.4-201ENST00000390971 SIRT4Q9Y6E7 314 aaPredicted RBP6.74□□□□□ -1.33
SNORA40.4-201ENST00000390971 PIP5K1BO14986 540 aa6.73□□□□□ -1.33
SNORA40.4-201ENST00000390971 NPC1O15118 1278 aa6.73□□□□□ -1.33
SNORA40.4-201ENST00000390971 TP73O15350 636 aa6.73□□□□□ -1.33
SNORA40.4-201ENST00000390971 USP12O75317 370 aa6.73□□□□□ -1.33
SNORA40.4-201ENST00000390971 SETSIPP0DME0 302 aa6.73□□□□□ -1.33
SNORA40.4-201ENST00000390971 SFPQP23246 707 aaKnown RBP eCLIP6.73□□□□□ -1.33
SNORA40.4-201ENST00000390971 MMP13P45452 471 aa6.73□□□□□ -1.33
SNORA40.4-201ENST00000390971 CBFBQ13951 182 aa6.73□□□□□ -1.33
SNORA40.4-201ENST00000390971 UBE4AQ14139 1066 aa6.73□□□□□ -1.33
SNORA40.4-201ENST00000390971 KPNB1Q14974 876 aaKnown RBP6.73□□□□□ -1.33
SNORA40.4-201ENST00000390971 ELF2Q15723 593 aa6.73□□□□□ -1.33
SNORA40.4-201ENST00000390971 XRRA1Q6P2D8 792 aa6.73□□□□□ -1.33
SNORA40.4-201ENST00000390971 TOGARAM2Q6ZUX3 1019 aa6.73□□□□□ -1.33
SNORA40.4-201ENST00000390971 KRT27Q7Z3Y8 459 aa6.73□□□□□ -1.33
SNORA40.4-201ENST00000390971 C1QL2Q7Z5L3 287 aa6.73□□□□□ -1.33
SNORA40.4-201ENST00000390971 MORC1Q86VD1 984 aa6.73□□□□□ -1.33
SNORA40.4-201ENST00000390971 IPO4Q8TEX9 1081 aaKnown RBP6.73□□□□□ -1.33
SNORA40.4-201ENST00000390971 GLMPQ8WWB7 406 aa6.73□□□□□ -1.33
SNORA40.4-201ENST00000390971 AKAP1Q92667 903 aaKnown RBP eCLIP6.73□□□□□ -1.33
SNORA40.4-201ENST00000390971 C18orf8Q96DM3 657 aa6.73□□□□□ -1.33
SNORA40.4-201ENST00000390971 ZNF778Q96MU6 729 aa6.73□□□□□ -1.33
SNORA40.4-201ENST00000390971 FBXO28Q9NVF7 368 aa6.73□□□□□ -1.33
SNORA40.4-201ENST00000390971 LRCH1Q9Y2L9 728 aa6.73□□□□□ -1.33
SNORA40.4-201ENST00000390971 TNFRSF18Q9Y5U5 241 aa6.73□□□□□ -1.33
SNORA40.4-201ENST00000390971 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.72□□□□□ -1.33
SNORA40.4-201ENST00000390971 CCDC194A0A1B0GVG4 234 aa6.72□□□□□ -1.33
SNORA40.4-201ENST00000390971 E5RJQ4 531 aa6.72□□□□□ -1.33
SNORA40.4-201ENST00000390971 CD63P08962 238 aa6.72□□□□□ -1.33
SNORA40.4-201ENST00000390971 ALADP13716 330 aa6.72□□□□□ -1.33
SNORA40.4-201ENST00000390971 LMO1P25800 156 aa6.72□□□□□ -1.33
SNORA40.4-201ENST00000390971 HOXD12P35452 270 aa6.72□□□□□ -1.33
SNORA40.4-201ENST00000390971 HTR3AP46098 478 aa6.72□□□□□ -1.33
SNORA40.4-201ENST00000390971 VPS41P49754 854 aa6.72□□□□□ -1.33
SNORA40.4-201ENST00000390971 TRIM71Q2Q1W2 868 aaKnown RBP6.72□□□□□ -1.33
SNORA40.4-201ENST00000390971 ZNF425Q6IV72 752 aa6.72□□□□□ -1.33
SNORA40.4-201ENST00000390971 UBE2Q1Q7Z7E8 422 aa6.72□□□□□ -1.33
SNORA40.4-201ENST00000390971 WDR60Q8WVS4 1066 aa6.72□□□□□ -1.33
SNORA40.4-201ENST00000390971 P2RY11Q96G91 374 aa6.72□□□□□ -1.33
SNORA40.4-201ENST00000390971 SENP7Q9BQF6 1050 aa6.72□□□□□ -1.33
SNORA40.4-201ENST00000390971 PAAF1Q9BRP4 392 aa6.72□□□□□ -1.33
SNORA40.4-201ENST00000390971 EPS8L2Q9H6S3 715 aa6.72□□□□□ -1.33
SNORA40.4-201ENST00000390971 SLC52A1Q9NWF4 448 aa6.72□□□□□ -1.33
SNORA40.4-201ENST00000390971 TUBA8Q9NY65 449 aaPredicted RBP6.72□□□□□ -1.33
SNORA40.4-201ENST00000390971 IGSF9Q9P2J2 1179 aa6.72□□□□□ -1.33
SNORA40.4-201ENST00000390971 RNF7Q9UBF6 113 aa6.72□□□□□ -1.33
SNORA40.4-201ENST00000390971 CDC23Q9UJX2 597 aa6.72□□□□□ -1.33
SNORA40.4-201ENST00000390971 UBE2J1Q9Y385 318 aaPredicted RBP6.72□□□□□ -1.33
SNORA40.4-201ENST00000390971 GOLGA6L3A6NEY3 463 aa6.71□□□□□ -1.34
SNORA40.4-201ENST00000390971 INPPL1O15357 1258 aa6.71□□□□□ -1.34
SNORA40.4-201ENST00000390971 FFAR2O15552 330 aa6.71□□□□□ -1.34
SNORA40.4-201ENST00000390971 TAF5LO75529 589 aa6.71□□□□□ -1.34
SNORA40.4-201ENST00000390971 ANXA6P08133 673 aa6.71□□□□□ -1.34
SNORA40.4-201ENST00000390971 ITGA5P08648 1049 aa6.71□□□□□ -1.34
SNORA40.4-201ENST00000390971 NPPBP16860 134 aa6.71□□□□□ -1.34
SNORA40.4-201ENST00000390971 ALDH18A1P54886 795 aaKnown RBP6.71□□□□□ -1.34
SNORA40.4-201ENST00000390971 YPEL5P62699 121 aa6.71□□□□□ -1.34
SNORA40.4-201ENST00000390971 BRD3Q15059 726 aa6.71□□□□□ -1.34
SNORA40.4-201ENST00000390971 PXDC1Q5TGL8 231 aa6.71□□□□□ -1.34
SNORA40.4-201ENST00000390971 C11orf87Q6NUJ2 197 aa6.71□□□□□ -1.34
SNORA40.4-201ENST00000390971 MSANTD2Q6P1R3 559 aa6.71□□□□□ -1.34
SNORA40.4-201ENST00000390971 PGBD2Q6P3X8 592 aa6.71□□□□□ -1.34
SNORA40.4-201ENST00000390971 KYAT3Q6YP21 454 aaKnown RBP6.71□□□□□ -1.34
SNORA40.4-201ENST00000390971 SIGLEC11Q96RL6 698 aa6.71□□□□□ -1.34
SNORA40.4-201ENST00000390971 PRPF18Q99633 342 aaKnown RBP6.71□□□□□ -1.34
SNORA40.4-201ENST00000390971 TMEM79Q9BSE2 394 aa6.71□□□□□ -1.34
SNORA40.4-201ENST00000390971 CDCP1Q9H5V8 836 aa6.71□□□□□ -1.34
SNORA40.4-201ENST00000390971 FSCN3Q9NQT6 498 aa6.71□□□□□ -1.34
SNORA40.4-201ENST00000390971 MAGED2Q9UNF1 606 aaPredicted RBP6.71□□□□□ -1.34
SNORA40.4-201ENST00000390971 C16orf96A6NNT2 1141 aa6.7□□□□□ -1.34
SNORA40.4-201ENST00000390971 PCDH17O14917 1159 aa6.7□□□□□ -1.34
SNORA40.4-201ENST00000390971 SERPINB3P29508 390 aa6.7□□□□□ -1.34
SNORA40.4-201ENST00000390971 GAB1Q13480 694 aa6.7□□□□□ -1.34
SNORA40.4-201ENST00000390971 KLF9Q13886 244 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms