RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 RAB20Q9NX57 234 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 RBAKQ9NYW8 714 aaPredicted RBP3.57□□□□□ -1.84
TRAV39-201ENST00000390466 BTBD7Q9P203 1132 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 NYNRINQ9P2P1 1898 aaKnown RBP3.57□□□□□ -1.84
TRAV39-201ENST00000390466 HESX1Q9UBX0 185 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 STK39Q9UEW8 545 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 SRP68Q9UHB9 627 aaKnown RBP3.57□□□□□ -1.84
TRAV39-201ENST00000390466 IP6K2Q9UHH9 426 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 NARFQ9UHQ1 456 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 SERPINB13Q9UIV8 391 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 CNOT11Q9UKZ1 510 aaKnown RBP3.57□□□□□ -1.84
TRAV39-201ENST00000390466 ZNF148Q9UQR1 794 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 TDRKHQ9Y2W6 561 aaKnown RBP3.57□□□□□ -1.84
TRAV39-201ENST00000390466 PCDHB2Q9Y5E7 798 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 AK5Q9Y6K8 562 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 ZHX2Q9Y6X8 837 aa3.57□□□□□ -1.84
TRAV39-201ENST00000390466 CHD5Q8TDI0 1954 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 SCN8AQ9UQD0 1980 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 PLXNA4Q9HCM2 1894 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 PAPPA2Q9BXP8 1791 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.56□□□□□ -1.84
TRAV39-201ENST00000390466 IQANK1A0A1B0GTG1 560 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 FUOMA2VDF0 154 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 HTR3EA5X5Y0 456 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 TMEM150BA6NC51 233 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 F8VP50 259 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 IPO5O00410 1097 aaKnown RBP3.56□□□□□ -1.84
TRAV39-201ENST00000390466 COPEO14579 308 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 CHADO15335 359 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 TLR3O15455 904 aaKnown RBP3.56□□□□□ -1.84
TRAV39-201ENST00000390466 DYNC1LI2O43237 492 aaPredicted RBP3.56□□□□□ -1.84
TRAV39-201ENST00000390466 MARCH6O60337 910 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 CBFA2T3O75081 653 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 LRCH4O75427 683 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 SUPT3HO75486 399 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 RNASEH2AO75792 299 aaKnown RBP3.56□□□□□ -1.84
TRAV39-201ENST00000390466 ZNF189O75820 626 aaPredicted RBP3.56□□□□□ -1.84
TRAV39-201ENST00000390466 SULT1C4O75897 302 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 BCAS2O75934 225 aaPredicted RBP3.56□□□□□ -1.84
TRAV39-201ENST00000390466 RSL1D1O76021 490 aaKnown RBP3.56□□□□□ -1.84
TRAV39-201ENST00000390466 KLHL2O95198 593 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 ATE1O95260 518 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 PIGRP01833 764 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 HLA-DRAP01903 254 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 ALDOAP04075 364 aaKnown RBP3.56□□□□□ -1.84
TRAV39-201ENST00000390466 ERBB2P04626 1255 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 SERPINE1P05121 402 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 EDN1P05305 212 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 SNRPAP09012 282 aaKnown RBP3.56□□□□□ -1.84
TRAV39-201ENST00000390466 WEE2P0C1S8 567 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 TFPTP0C1Z6 253 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 FAM58BPP0C7Q3 252 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 COX4I1P13073 169 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 CCDC130P13994 396 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 CD247P20963 164 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 GJC1P36383 396 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 TCF7P36402 384 aaPredicted RBP3.56□□□□□ -1.84
TRAV39-201ENST00000390466 GMPRP36959 345 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 GABRB2P47870 512 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 BCAP31P51572 246 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 COPAP53621 1224 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 EPHB1P54762 984 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 ALDH18A1P54886 795 aaKnown RBP3.56□□□□□ -1.84
TRAV39-201ENST00000390466 MLLT10P55197 1068 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 RAB15P59190 212 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 TMPRSS15P98073 1019 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 MS4A2Q01362 244 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 CD300CQ08708 224 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 PPIDQ08752 370 aaKnown RBP3.56□□□□□ -1.84
TRAV39-201ENST00000390466 NFIAQ12857 509 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 IKBKEQ14164 716 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 PPP2R5DQ14738 602 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 HERC3Q15034 1050 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 PDK1Q15118 436 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 NOMO1Q15155 1222 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 GRAMD1BQ3KR37 738 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 BBS9Q3SYG4 887 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 MGAT5BQ3V5L5 792 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 KCTD21Q4G0X4 260 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 DCAF6Q58WW2 860 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 TCHHL1Q5QJ38 904 aaPredicted RBP3.56□□□□□ -1.84
TRAV39-201ENST00000390466 MFSD14BQ5SR56 506 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 C6orf52Q5T4I8 152 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 C6orf163Q5TEZ5 329 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 TDRD10Q5VZ19 366 aaKnown RBP3.56□□□□□ -1.84
TRAV39-201ENST00000390466 ATG16L1Q676U5 607 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 SLFN13Q68D06 897 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 SMYD5Q6GMV2 418 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 SPOPLQ6IQ16 392 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 NANOGP8Q6NSW7 305 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 HMBOX1Q6NT76 420 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 TRNP1Q6NT89 227 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 APOBEC3HQ6NTF7 200 aaKnown RBP3.56□□□□□ -1.84
TRAV39-201ENST00000390466 RWDD4Q6NW29 188 aaKnown RBP3.56□□□□□ -1.84
TRAV39-201ENST00000390466 CDC42EP5Q6NZY7 148 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 C8orf82Q6P1X6 216 aaPredicted RBP3.56□□□□□ -1.84
TRAV39-201ENST00000390466 C16orf46Q6P387 395 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 LRRC8BQ6P9F7 803 aa3.56□□□□□ -1.84
TRAV39-201ENST00000390466 TRMT10BQ6PF06 316 aaKnown RBP3.56□□□□□ -1.84
TRAV39-201ENST00000390466 EPGNQ6UW88 154 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms