RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 ACTR8Q9H981 624 aa15.29■□□□□ 0.04
SNPH-202ENST00000381873 RAD54BQ9Y620 910 aa15.29■□□□□ 0.04
SNPH-202ENST00000381873 TUBP50607 506 aa15.29■□□□□ 0.04
SNPH-202ENST00000381873 PLIN5Q00G26 463 aa15.29■□□□□ 0.04
SNPH-202ENST00000381873 UMODL1Q5DID0 1318 aa15.29■□□□□ 0.04
SNPH-202ENST00000381873 SEL1L3Q68CR1 1132 aa15.29■□□□□ 0.04
SNPH-202ENST00000381873 CAPRIN2Q6IMN6 1127 aaKnown RBP15.29■□□□□ 0.04
SNPH-202ENST00000381873 ATXN3LQ9H3M9 355 aa15.29■□□□□ 0.04
SNPH-202ENST00000381873 CAPN10Q9HC96 672 aa15.29■□□□□ 0.04
SNPH-202ENST00000381873 SHOC2Q9UQ13 582 aa15.29■□□□□ 0.04
SNPH-202ENST00000381873 USP20Q9Y2K6 914 aa15.29■□□□□ 0.04
SNPH-202ENST00000381873 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.29■□□□□ 0.04
SNPH-202ENST00000381873 SLCO1B7G3V0H7 640 aa15.29■□□□□ 0.04
SNPH-202ENST00000381873 GAD1Q99259 594 aa15.29■□□□□ 0.04
SNPH-202ENST00000381873 UTP6Q9NYH9 597 aaKnown RBP15.29■□□□□ 0.04
SNPH-202ENST00000381873 SNCAIPQ9Y6H5 919 aa15.29■□□□□ 0.04
SNPH-202ENST00000381873 MGAT4DA6NG13 374 aa15.29■□□□□ 0.04
SNPH-202ENST00000381873 O00370 1275 aa15.29■□□□□ 0.04
SNPH-202ENST00000381873 PCDH8O95206 1070 aa15.29■□□□□ 0.04
SNPH-202ENST00000381873 GUCA1CO95843 209 aa15.29■□□□□ 0.04
SNPH-202ENST00000381873 LGALS2P05162 132 aa15.29■□□□□ 0.04
SNPH-202ENST00000381873 CPA3P15088 417 aa15.29■□□□□ 0.04
SNPH-202ENST00000381873 CSHL1Q14406 222 aa15.29■□□□□ 0.04
SNPH-202ENST00000381873 NLRP9Q7RTR0 991 aa15.29■□□□□ 0.04
SNPH-202ENST00000381873 PTAR1Q7Z6K3 402 aaPredicted RBP15.29■□□□□ 0.04
SNPH-202ENST00000381873 ZBTB45Q96K62 511 aaPredicted RBP15.29■□□□□ 0.04
SNPH-202ENST00000381873 ADAM2Q99965 735 aa15.29■□□□□ 0.04
SNPH-202ENST00000381873 GANQ9H2C0 597 aa15.29■□□□□ 0.04
SNPH-202ENST00000381873 RMND5AQ9H871 391 aa15.29■□□□□ 0.04
SNPH-202ENST00000381873 HPS4Q9NQG7 708 aa15.29■□□□□ 0.04
SNPH-202ENST00000381873 THG1LQ9NWX6 298 aaKnown RBP15.29■□□□□ 0.04
SNPH-202ENST00000381873 BAZ2BQ9UIF8 2168 aaKnown RBP15.29■□□□□ 0.04
SNPH-202ENST00000381873 CYTH3O43739 400 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 RTN3O95197 1032 aaPredicted RBP15.28■□□□□ 0.04
SNPH-202ENST00000381873 DARSP14868 501 aaKnown RBP15.28■□□□□ 0.04
SNPH-202ENST00000381873 CCND1P24385 295 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 PBLDP30039 288 aaPredicted RBP15.28■□□□□ 0.04
SNPH-202ENST00000381873 VGLL4Q14135 290 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 POU6F1Q14863 301 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 DEFB106AQ8N104 65 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 LPCAT1Q8NF37 534 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 ELOVL6Q9H5J4 265 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 IMPAD1Q9NX62 359 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 ROBO1Q9Y6N7 1651 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 ALBP02768 609 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 TPBGLP0DKB5 382 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 GALNTL6Q49A17 601 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 DEPDC1Q5TB30 811 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 MFSD4BQ5TF39 518 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 PLD3Q8IV08 490 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 SLC44A2Q8IWA5 706 aaPredicted RBP15.28■□□□□ 0.04
SNPH-202ENST00000381873 SCUBE3Q8IX30 993 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 TINF2Q9BSI4 451 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 TSEN34Q9BSV6 310 aaKnown RBP15.28■□□□□ 0.04
SNPH-202ENST00000381873 DYRK3O43781 588 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 HMGCRP04035 888 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 ACADMP11310 421 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 DYNC1I2Q13409 638 aaKnown RBP15.28■□□□□ 0.04
SNPH-202ENST00000381873 NT5DC3Q86UY8 548 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 RIOX2Q8IUF8 465 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 PRKD2Q9BZL6 878 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 BLOC1S4Q9NUP1 217 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 RBAK-RBAKDNI3L0D1 243 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 IFRD1O00458 451 aaPredicted RBP15.28■□□□□ 0.04
SNPH-202ENST00000381873 MAP3K13O43283 966 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 XYLBO75191 536 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 DEAF1O75398 565 aaPredicted RBP15.28■□□□□ 0.04
SNPH-202ENST00000381873 RECQL4O94761 1208 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 RFX3P48380 749 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 PLD1Q13393 1074 aa15.28■□□□□ 0.04
SNPH-202ENST00000381873 UBA1P22314 1058 aaKnown RBP15.27■□□□□ 0.04
SNPH-202ENST00000381873 HALP42357 657 aa15.27■□□□□ 0.04
SNPH-202ENST00000381873 CD151P48509 253 aa15.27■□□□□ 0.04
SNPH-202ENST00000381873 TMEM51Q9NW97 253 aa15.27■□□□□ 0.04
SNPH-202ENST00000381873 TUBGCP4Q9UGJ1 667 aa15.27■□□□□ 0.04
SNPH-202ENST00000381873 TRHDEQ9UKU6 1024 aa15.27■□□□□ 0.04
SNPH-202ENST00000381873 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.27■□□□□ 0.04
SNPH-202ENST00000381873 PIK3CDO00329 1044 aa15.27■□□□□ 0.04
SNPH-202ENST00000381873 ARHGEF9O43307 516 aa15.27■□□□□ 0.04
SNPH-202ENST00000381873 CABYRO75952 493 aa15.27■□□□□ 0.04
SNPH-202ENST00000381873 AMHP03971 560 aa15.27■□□□□ 0.04
SNPH-202ENST00000381873 EIF4BP23588 611 aaKnown RBP15.27■□□□□ 0.04
SNPH-202ENST00000381873 CLK1P49759 484 aaKnown RBP15.27■□□□□ 0.04
SNPH-202ENST00000381873 PTENP60484 403 aa15.27■□□□□ 0.04
SNPH-202ENST00000381873 CCDC157Q569K6 752 aa15.27■□□□□ 0.04
SNPH-202ENST00000381873 MICU2Q8IYU8 434 aa15.27■□□□□ 0.04
SNPH-202ENST00000381873 WDR48Q8TAF3 677 aa15.27■□□□□ 0.04
SNPH-202ENST00000381873 MTMR8Q96EF0 704 aa15.27■□□□□ 0.04
SNPH-202ENST00000381873 NDEL1Q9GZM8 345 aa15.27■□□□□ 0.04
SNPH-202ENST00000381873 UXTQ9UBK9 157 aaPredicted RBP15.27■□□□□ 0.04
SNPH-202ENST00000381873 GNG14A0A1W2PPG7 69 aa15.27■□□□□ 0.03
SNPH-202ENST00000381873 ERI2A8K979 691 aaKnown RBP15.27■□□□□ 0.03
SNPH-202ENST00000381873 PDZK1P1A8MUH7 402 aa15.27■□□□□ 0.03
SNPH-202ENST00000381873 GSNP06396 782 aa15.27■□□□□ 0.03
SNPH-202ENST00000381873 TFE3P19532 575 aaPredicted RBP15.27■□□□□ 0.03
SNPH-202ENST00000381873 PSMA4P25789 261 aaKnown RBP15.27■□□□□ 0.03
SNPH-202ENST00000381873 NEK2P51955 445 aa15.27■□□□□ 0.03
SNPH-202ENST00000381873 CSTF3Q12996 717 aaKnown RBP15.27■□□□□ 0.03
SNPH-202ENST00000381873 KDM7AQ6ZMT4 941 aa15.27■□□□□ 0.03
SNPH-202ENST00000381873 TMEM86AQ8N2M4 240 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms