RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 OR9Q1Q8NGQ5 310 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 SPOCK2Q92563 424 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 LPAR1Q92633 364 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 RMND5BQ96G75 393 aaPredicted RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 INPP4AQ96PE3 977 aaPredicted RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 SPAG4Q9NPE6 437 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 SYBUQ9NX95 663 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 SUPT3HB4E1H0 165 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 RBAK-RBAKDNI3L0D1 243 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 TRDMT1O14717 391 aaKnown RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 USP12O75317 370 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 FSTL1Q12841 308 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 NFIAQ12857 509 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 CSTF3Q12996 717 aaKnown RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 KCNV1Q6PIU1 500 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 PCDH20Q8N6Y1 951 aaKnown RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 CNPY3Q9BT09 278 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 FGFBP2Q9BYJ0 223 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 CEP44Q9C0F1 390 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 IKZF4Q9H2S9 585 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 DENND2DQ9H6A0 471 aaPredicted RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 ACAD9Q9H845 621 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 RMI1Q9H9A7 625 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 CYLDQ9NQC7 956 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 KCNK1O00180 336 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 NR3C2P08235 984 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 CREB1P16220 341 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 HNRNPH3P31942 346 aaKnown RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 NR2C2P49116 596 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 POU4F1Q01851 419 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 DPYSL3Q14195 570 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 FASTKQ14296 549 aaKnown RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 DGKDQ16760 1214 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 LACTB2Q53H82 288 aaPredicted RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 BOLA3Q53S33 107 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 GJC2Q5T442 439 aaPredicted RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 GRTP1Q5TC63 336 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 NPNTQ6UXI9 565 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 RASGEF1CQ8N431 466 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 DMAP1Q9NPF5 467 aaPredicted RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 NDUFAF1Q9Y375 327 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 C2CD2LO14523 706 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 ZC3H11AO75152 810 aaKnown RBP eCLIP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 MAP3K7CLP57077 242 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 PDK1Q15118 436 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 RTKN2Q8IZC4 609 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 HS6ST3Q8IZP7 471 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 TTLL6Q8N841 843 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 TERB1Q8NA31 727 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 RBM15BQ8NDT2 890 aaKnown RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 TSPAN14Q8NG11 270 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 URGCPQ8TCY9 931 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 RXFP2Q8WXD0 754 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 C1orf50Q9BV19 199 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 DDIT4Q9NX09 232 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 KLK14Q9P0G3 267 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 PNMA8BQ9ULN7 279 aaPredicted RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 SLC12A4Q9UP95 1085 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 AP4E1Q9UPM8 1137 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 ACTL7BQ9Y614 415 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 TXNP10599 105 aaKnown RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 CDH2P19022 906 aaPredicted RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 CHRNA5P30532 468 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 PPP3CCP48454 512 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 GSSP48637 474 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 HIRAP54198 1017 aaPredicted RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 RIPK1Q13546 671 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 TRIM25Q14258 630 aaKnown RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 KCNMB4Q86W47 210 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 ABRAQ8N0Z2 381 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 LINC00116Q8NCU8 138 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 ASIC4Q96FT7 647 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 ZNF518BQ9C0D4 1074 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 WDR41Q9HAD4 459 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 GPAMQ9HCL2 828 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 DPP3Q9NY33 737 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 STK39Q9UEW8 545 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 POLIQ9UNA4 740 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 SATB2Q9UPW6 733 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 ATP6AP2A0A1C7CYW4 349 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 TCRBV7S2A1N4TA0A589 114 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 KANSL1LA0AUZ9 987 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 SAC3D1A6NKF1 404 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 SLCO1B7G3V0H7 640 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 TAF4O00268 1085 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 ATP6AP2O75787 350 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 FAM155BO75949 473 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 MPOP05164 745 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 MAMLD1Q13495 774 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 CSHL1Q14406 222 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 PARP6Q2NL67 630 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 KYAT3Q6YP21 454 aaKnown RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 C3orf67Q6ZVT6 689 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 C1orf186Q6ZWK4 172 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 CALML6Q8TD86 181 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 LZICQ8WZA0 190 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 CIB1Q99828 191 aa4.3□□□□□ -1.72
BRCA2-201ENST00000380152 MMTAG2Q9BU76 263 aaKnown RBP4.3□□□□□ -1.72
BRCA2-201ENST00000380152 NYAP2Q9P242 653 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms