RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 LCLAT1Q6UWP7 414 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 TAS1R1Q7RTX1 841 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 PPIL6Q8IXY8 311 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 C3orf58Q8NDZ4 430 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 CCT6BQ92526 530 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 GAS2L1Q99501 681 aaPredicted RBP16.14■□□□□ 0.17
CCDC40-202ENST00000374876 CNPY3Q9BT09 278 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 COLEC11Q9BWP8 271 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 VN1R3Q9BXE9 311 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 C10orf88Q9H8K7 445 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 EURLQ9NYK6 297 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 TSPAN16Q9UKR8 245 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 TRANK1O15050 2925 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 CCT8L1PA6NM43 557 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 APOC4-APOC2K7ER74 178 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 PIK3R2O00459 728 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 MCF2LO15068 1137 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 B3GAT3O94766 335 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 APOC2P02655 101 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 STX2P32856 288 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 IRS1P35568 1242 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 GDF10P55107 478 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 MPP2Q14168 576 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 TAF5Q15542 800 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 OR6B2Q6IFH4 312 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 PPP1R21Q6ZMI0 780 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 CAPN12Q6ZSI9 719 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 CNPY4Q8N129 248 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 GDAP1Q8TB36 358 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 MICAL1Q8TDZ2 1067 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 CKAP2Q8WWK9 683 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 MAK16Q9BXY0 300 aaKnown RBP16.14■□□□□ 0.17
CCDC40-202ENST00000374876 UBQLN1Q9UMX0 589 aaKnown RBP16.14■□□□□ 0.17
CCDC40-202ENST00000374876 FARP1Q9Y4F1 1045 aaPredicted RBP16.14■□□□□ 0.17
CCDC40-202ENST00000374876 PDCD11Q14690 1871 aaKnown RBP16.14■□□□□ 0.17
CCDC40-202ENST00000374876 EYSQ5T1H1 3165 aa16.14■□□□□ 0.17
CCDC40-202ENST00000374876 COL4A4P53420 1690 aaPredicted RBP16.13■□□□□ 0.17
CCDC40-202ENST00000374876 PRRC2BQ5JSZ5 2229 aaKnown RBP16.13■□□□□ 0.17
CCDC40-202ENST00000374876 E5RJQ4 531 aa16.13■□□□□ 0.17
CCDC40-202ENST00000374876 POC1B-GALNT4F8VUJ3 575 aa16.13■□□□□ 0.17
CCDC40-202ENST00000374876 ATP2C2O75185 946 aa16.13■□□□□ 0.17
CCDC40-202ENST00000374876 PDGFRAP16234 1089 aa16.13■□□□□ 0.17
CCDC40-202ENST00000374876 EIF3EP60228 445 aaKnown RBP16.13■□□□□ 0.17
CCDC40-202ENST00000374876 ADCY1Q08828 1119 aa16.13■□□□□ 0.17
CCDC40-202ENST00000374876 CCDC142Q17RM4 750 aa16.13■□□□□ 0.17
CCDC40-202ENST00000374876 LACTB2Q53H82 288 aaPredicted RBP16.13■□□□□ 0.17
CCDC40-202ENST00000374876 CD300LGQ6UXG3 332 aa16.13■□□□□ 0.17
CCDC40-202ENST00000374876 TDRPQ86YL5 185 aa16.13■□□□□ 0.17
CCDC40-202ENST00000374876 MAML1Q92585 1016 aa16.13■□□□□ 0.17
CCDC40-202ENST00000374876 GPR62Q9BZJ7 368 aa16.13■□□□□ 0.17
CCDC40-202ENST00000374876 ADAM28Q9UKQ2 775 aa16.13■□□□□ 0.17
CCDC40-202ENST00000374876 PPEF2O14830 753 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 FOSL2P15408 326 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 CYP3A5P20815 502 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 RPL22P35268 128 aaKnown RBP16.12■□□□□ 0.17
CCDC40-202ENST00000374876 ARL4CP56559 192 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 STILQ15468 1287 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 GOLGA7BQ2TAP0 167 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 NUGGCQ68CJ6 796 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 DCLRE1AQ6PJP8 1040 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 FAM183BPQ6ZVS7 135 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 DDX53Q86TM3 631 aaKnown RBP16.12■□□□□ 0.17
CCDC40-202ENST00000374876 VPS52Q8N1B4 723 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 C12orf29Q8N999 325 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 BEST2Q8NFU1 509 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 RXFP2Q8WXD0 754 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 CPT1BQ92523 772 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 B3GALT6Q96L58 329 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.12■□□□□ 0.17
CCDC40-202ENST00000374876 FGFR1OP2Q9NVK5 253 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 DERAQ9Y315 318 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 MTCH2Q9Y6C9 303 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 FAM47DPA6NHR8 397 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 C2CD4BA6NLJ0 364 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 I3L4J1 428 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 PRPSAP2O60256 369 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 SNX3O60493 162 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 GCAP28676 217 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 BRCC3P46736 316 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 CDH6P55285 790 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 SPRED3Q2MJR0 410 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 SH3PXD2AQ5TCZ1 1133 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 ANKMY2Q8IV38 441 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 FAM71DQ8N9W8 422 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 SPATA18Q8TC71 538 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 AUTS2Q8WXX7 1259 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 UROC1Q96N76 676 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 PEBP4Q96S96 227 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 PPCSQ9HAB8 311 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 TLR9Q9NR96 1032 aa16.12■□□□□ 0.17
CCDC40-202ENST00000374876 XPOTO43592 962 aaKnown RBP16.11■□□□□ 0.17
CCDC40-202ENST00000374876 GRAP2O75791 330 aa16.11■□□□□ 0.17
CCDC40-202ENST00000374876 RBP3P10745 1247 aa16.11■□□□□ 0.17
CCDC40-202ENST00000374876 KRT15P19012 456 aa16.11■□□□□ 0.17
CCDC40-202ENST00000374876 CA8P35219 290 aa16.11■□□□□ 0.17
CCDC40-202ENST00000374876 PHBP35232 272 aa16.11■□□□□ 0.17
CCDC40-202ENST00000374876 SCTRP47872 440 aa16.11■□□□□ 0.17
CCDC40-202ENST00000374876 CCDC85BQ15834 202 aaPredicted RBP16.11■□□□□ 0.17
CCDC40-202ENST00000374876 CDO1Q16878 200 aa16.11■□□□□ 0.17
CCDC40-202ENST00000374876 ANKRD22Q5VYY1 191 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms