RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 TEKT1Q969V4 418 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 IQCDQ96DY2 449 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 CALML4Q96GE6 196 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 MASTLQ96GX5 879 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 DESI2Q9BSY9 194 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 MMTAG2Q9BU76 263 aaKnown RBP5.24□□□□□ -1.57
USP48-202ENST00000374730 TUBB2BQ9BVA1 445 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 RAB34Q9BZG1 259 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 LRRC27Q9C0I9 530 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 VPS16Q9H269 839 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 CPVLQ9H3G5 476 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 MRPL44Q9H9J2 332 aaKnown RBP5.24□□□□□ -1.57
USP48-202ENST00000374730 JMJD4Q9H9V9 463 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 IFT122Q9HBG6 1241 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 RIC8AQ9NPQ8 531 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 DDX4Q9NQI0 724 aaKnown RBP5.24□□□□□ -1.57
USP48-202ENST00000374730 ABHD10Q9NUJ1 306 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 EXOC1Q9NV70 894 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 MYO1AQ9UBC5 1043 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 DKK2Q9UBU2 259 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 PACSIN3Q9UKS6 424 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 MRFAP1Q9Y605 127 aa5.24□□□□□ -1.57
USP48-202ENST00000374730 RBBP6Q7Z6E9 1792 aaKnown RBP5.24□□□□□ -1.57
USP48-202ENST00000374730 PVALEFA0A1B0GWK0 134 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 TRIM49BA6NDI0 452 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 ALG1L2C9J202 215 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 ZBTB5O15062 677 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 ADCY6O43306 1168 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 EDIL3O43854 480 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 AKR1B10O60218 316 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 KIF5CO60282 957 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 NCR1O76036 304 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 URI1O94763 535 aaPredicted RBP5.23□□□□□ -1.57
USP48-202ENST00000374730 KRT9P35527 623 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 MRPL12P52815 198 aaKnown RBP5.23□□□□□ -1.57
USP48-202ENST00000374730 CLRN1P58418 232 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 RNASE9P60153 205 aaKnown RBP5.23□□□□□ -1.57
USP48-202ENST00000374730 TUBB4BP68371 445 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 ASIC1P78348 528 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 CDK17Q00537 523 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 UBXN1Q04323 297 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 FSTL1Q12841 308 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 SP140Q13342 867 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 PICALMQ13492 652 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 MTF1Q14872 753 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 SEPT2Q15019 361 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 ERCC6LQ2NKX8 1250 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 ARHGAP29Q52LW3 1261 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 HYIQ5T013 277 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 JAKMIP3Q5VZ66 844 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 APOBEC3HQ6NTF7 200 aaKnown RBP5.23□□□□□ -1.57
USP48-202ENST00000374730 MOXD1Q6UVY6 613 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 UNC13DQ70J99 1090 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 RSRC2Q7L4I2 434 aaKnown RBP5.23□□□□□ -1.57
USP48-202ENST00000374730 VRK3Q8IV63 474 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 FMNL3Q8IVF7 1028 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 KIAA0895Q8NCT3 520 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 CUL5Q93034 780 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 ZG16BQ96DA0 208 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 MBOAT7Q96N66 472 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 ERGIC2Q96RQ1 377 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 WDR24Q96S15 920 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 NUP58Q9BVL2 599 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 CARD6Q9BX69 1037 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 IDI2Q9BXS1 227 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 KRTAP17-1Q9BYP8 105 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 TTYH3Q9C0H2 523 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 UBA5Q9GZZ9 404 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 QRSL1Q9H0R6 528 aaKnown RBP5.23□□□□□ -1.57
USP48-202ENST00000374730 TMX4Q9H1E5 349 aaPredicted RBP5.23□□□□□ -1.57
USP48-202ENST00000374730 DHX36Q9H2U1 1008 aaKnown RBP5.23□□□□□ -1.57
USP48-202ENST00000374730 TOR3AQ9H497 397 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 VAT1LQ9HCJ6 419 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 RBM12Q9NTZ6 932 aaKnown RBP5.23□□□□□ -1.57
USP48-202ENST00000374730 BLOC1S4Q9NUP1 217 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 ARGLU1Q9NWB6 273 aaPredicted RBP5.23□□□□□ -1.57
USP48-202ENST00000374730 NYAP2Q9P242 653 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 LRWD1Q9UFC0 647 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.23□□□□□ -1.57
USP48-202ENST00000374730 CAPN11Q9UMQ6 739 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 G3BP2Q9UN86 482 aaKnown RBP5.23□□□□□ -1.57
USP48-202ENST00000374730 V9GYY5 206 aaPredicted RBP5.23□□□□□ -1.57
USP48-202ENST00000374730 ATRNL1Q5VV63 1379 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 FRMPD2Q68DX3 1309 aaPredicted RBP5.23□□□□□ -1.57
USP48-202ENST00000374730 KDM3AQ9Y4C1 1321 aa5.23□□□□□ -1.57
USP48-202ENST00000374730 CYP3A7-CYP3A51PA0A087WV96 503 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 TTC26A0AVF1 554 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 MARCH11A6NNE9 402 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 CXorf49A8MYA2 514 aaPredicted RBP5.22□□□□□ -1.57
USP48-202ENST00000374730 ATP8B1O43520 1251 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 SLC37A4O43826 429 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 ZRANB2O95218 330 aaKnown RBP eCLIP5.22□□□□□ -1.57
USP48-202ENST00000374730 TDP2O95551 362 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 FGFR1OPO95684 399 aaKnown RBP5.22□□□□□ -1.57
USP48-202ENST00000374730 ALOX15P16050 662 aaPredicted RBP5.22□□□□□ -1.57
USP48-202ENST00000374730 CYP3A7P24462 503 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 PTPN7P35236 360 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 ARHGAP25P42331 645 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 TECP42680 631 aa5.22□□□□□ -1.57
USP48-202ENST00000374730 NANOS3P60323 173 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms