RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 ILDR1Q86SU0 546 aaPredicted RBP13.25□□□□□ -0.29
PTPRK-207ENST00000368226 EXD1Q8NHP7 514 aa13.25□□□□□ -0.29
PTPRK-207ENST00000368226 MTMR8Q96EF0 704 aa13.25□□□□□ -0.29
PTPRK-207ENST00000368226 SHOC2Q9UQ13 582 aa13.25□□□□□ -0.29
PTPRK-207ENST00000368226 PDZK1P1A8MUH7 402 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 SMIM10L2AP0DMW4 78 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 SMIM10L2BP0DMW5 78 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 TNFSF9P41273 254 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 MPP3Q13368 585 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 LRRC23Q53EV4 343 aaPredicted RBP13.24□□□□□ -0.29
PTPRK-207ENST00000368226 PLD3Q8IV08 490 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 GRIN3AQ8TCU5 1115 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 PHF21AQ96BD5 680 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 TSEN34Q9BSV6 310 aaKnown RBP13.24□□□□□ -0.29
PTPRK-207ENST00000368226 ZDHHC6Q9H6R6 413 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 DMAP1Q9NPF5 467 aaPredicted RBP13.24□□□□□ -0.29
PTPRK-207ENST00000368226 PADI4Q9UM07 663 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 TRIM66O15016 1216 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 PEX10O60683 326 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 NFICP08651 508 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 PYGMP11217 842 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 AQP5P55064 265 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 YWHAZP63104 245 aaKnown RBP13.24□□□□□ -0.29
PTPRK-207ENST00000368226 MED21Q13503 144 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 C15orf59Q2T9L4 293 aaPredicted RBP13.24□□□□□ -0.29
PTPRK-207ENST00000368226 CELF3Q5SZQ8 465 aaKnown RBP13.24□□□□□ -0.29
PTPRK-207ENST00000368226 TREML2Q5T2D2 321 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 PRR23CQ6ZRP0 262 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 NYAP1Q6ZVC0 841 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 MTFMTQ96DP5 389 aaKnown RBP13.24□□□□□ -0.29
PTPRK-207ENST00000368226 FAM84AQ96KN4 292 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 ULBP1Q9BZM6 244 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 AGLP35573 1532 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 MROH7Q68CQ1 1323 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 YBX3P16989 372 aaKnown RBP eCLIP13.24□□□□□ -0.292e-6■□□□□ 10.6
PTPRK-207ENST00000368226 KCNMA1Q12791 1236 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 NPNTQ6UXI9 565 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 AGGF1Q8N302 714 aaeCLIP13.24□□□□□ -0.29
PTPRK-207ENST00000368226 TDRD5Q8NAT2 981 aaKnown RBP13.24□□□□□ -0.29
PTPRK-207ENST00000368226 HELQQ8TDG4 1101 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 CCDC3Q9BQI4 270 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 TINF2Q9BSI4 451 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 BAIAP3O94812 1187 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 ZBTB17Q13105 803 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 PHKG1Q16816 387 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 TRIM60Q495X7 471 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 IYDQ6PHW0 289 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 BLOC1S4Q9NUP1 217 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 NFASCO94856 1347 aa13.24□□□□□ -0.29
PTPRK-207ENST00000368226 KRT87PA6NCN2 255 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 KPNA3O00505 521 aaPredicted RBP13.23□□□□□ -0.29
PTPRK-207ENST00000368226 BUD23O43709 281 aaKnown RBP13.23□□□□□ -0.29
PTPRK-207ENST00000368226 GLI1P08151 1106 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 GZMAP12544 262 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 CDKAL1Q5VV42 579 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 DET1Q7L5Y6 550 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 GLT6D1Q7Z4J2 308 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 SAMD3Q8N6K7 520 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 RBBP8Q99708 897 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 FBXO44Q9H4M3 255 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 SYTL2Q9HCH5 934 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 CYP39A1Q9NYL5 469 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 SLC27A5Q9Y2P5 690 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 SMNDC1O75940 238 aaKnown RBP eCLIP13.23□□□□□ -0.29
PTPRK-207ENST00000368226 IRAK1P51617 712 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 CNTN1Q12860 1018 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 SGCGQ13326 291 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 NETO2Q8NC67 525 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 IL31RAQ8NI17 732 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 SENP8Q96LD8 212 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 WDR18Q9BV38 432 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 PPCSQ9HAB8 311 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 WHRNQ9P202 907 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 IQGAP1P46940 1657 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 FRMPD4Q14CM0 1322 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 MGAT4DA6NG13 374 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 TIMM44O43615 452 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 EFCAB14O75071 495 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 ZNF682O95780 498 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 HMGCRP04035 888 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 CDH2P19022 906 aaPredicted RBP13.23□□□□□ -0.29
PTPRK-207ENST00000368226 MAP3K10Q02779 954 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 NFYCQ13952 458 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 RBM23Q86U06 439 aaKnown RBP13.23□□□□□ -0.29
PTPRK-207ENST00000368226 CATSPER1Q8NEC5 780 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 POU1F1P28069 291 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 ELK3P41970 407 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 CCNG1P51959 295 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 VN1R5Q7Z5H4 357 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 CENPLQ8N0S6 344 aaPredicted RBP13.23□□□□□ -0.29
PTPRK-207ENST00000368226 ZMYM5Q9UJ78 669 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 DAB2IPQ5VWQ8 1189 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 TAF2Q6P1X5 1199 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 MFSD7Q6UXD7 560 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 GPR142Q7Z601 462 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 ZBTB10Q96DT7 871 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 CATSPER2Q96P56 530 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 DCLK3Q9C098 648 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 LNPEPQ9UIQ6 1025 aa13.23□□□□□ -0.29
PTPRK-207ENST00000368226 APPL1Q9UKG1 709 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms