RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 ZNF229Q9UJW7 825 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 TCRBV7S2A1N4TA0A589 114 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 MYO1GB0I1T2 1018 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 ZSCAN9O15535 394 aaPredicted RBP11.78□□□□□ -0.52
RD3-201ENST00000367002 TBC1D4O60343 1298 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 CLASP2O75122 1294 aaKnown RBP11.78□□□□□ -0.52
RD3-201ENST00000367002 ZNF286BP0CG31 522 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 AKAP5P24588 427 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 NR2C2P49116 596 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 RNF43Q68DV7 783 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.78□□□□□ -0.52
RD3-201ENST00000367002 OR9Q1Q8NGQ5 310 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 GANCQ8TET4 914 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 ZBED2Q9BTP6 218 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 NRDE2Q9H7Z3 1164 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 ASTN2O75129 1339 aaPredicted RBP11.78□□□□□ -0.52
RD3-201ENST00000367002 ADAMTS3O15072 1205 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 ABHD2P08910 425 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 RBP1P09455 135 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 CETPP11597 493 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 AKT1P31749 480 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 PCYT1AP49585 367 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 BST1Q10588 318 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 CDH17Q12864 832 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 NPNTQ6UXI9 565 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 PHF13Q86YI8 300 aaPredicted RBP11.78□□□□□ -0.52
RD3-201ENST00000367002 PIWIL2Q8TC59 973 aaKnown RBP11.78□□□□□ -0.52
RD3-201ENST00000367002 SLC2A14Q8TDB8 520 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 DDI1Q8WTU0 396 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 VPS50Q96JG6 964 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 CATSPER2Q96P56 530 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 P2RX7Q99572 595 aaKnown RBP11.78□□□□□ -0.52
RD3-201ENST00000367002 CHCHD3Q9NX63 227 aaKnown RBP11.78□□□□□ -0.52
RD3-201ENST00000367002 CYP39A1Q9NYL5 469 aa11.78□□□□□ -0.52
RD3-201ENST00000367002 MAGEB16A2A368 324 aa11.77□□□□□ -0.52
RD3-201ENST00000367002 MAN1A2O60476 641 aa11.77□□□□□ -0.52
RD3-201ENST00000367002 FBXO21O94952 628 aa11.77□□□□□ -0.52
RD3-201ENST00000367002 VAPBO95292 243 aa11.77□□□□□ -0.52
RD3-201ENST00000367002 THP07101 528 aa11.77□□□□□ -0.52
RD3-201ENST00000367002 ODC1P11926 461 aa11.77□□□□□ -0.52
RD3-201ENST00000367002 UBA1P22314 1058 aaKnown RBP11.77□□□□□ -0.52
RD3-201ENST00000367002 ABCG1P45844 678 aa11.77□□□□□ -0.52
RD3-201ENST00000367002 TRABD2AQ86V40 505 aa11.77□□□□□ -0.52
RD3-201ENST00000367002 TAGAPQ8N103 731 aa11.77□□□□□ -0.52
RD3-201ENST00000367002 DDX50Q9BQ39 737 aaKnown RBP11.77□□□□□ -0.52
RD3-201ENST00000367002 KCNK4Q9NYG8 393 aa11.77□□□□□ -0.52
RD3-201ENST00000367002 M0R3G1 203 aa11.77□□□□□ -0.52
RD3-201ENST00000367002 UBDO15205 165 aa11.77□□□□□ -0.52
RD3-201ENST00000367002 DDX3YO15523 660 aaKnown RBP11.77□□□□□ -0.52
RD3-201ENST00000367002 ZNF23P17027 643 aa11.77□□□□□ -0.52
RD3-201ENST00000367002 SERPINB10P48595 397 aa11.77□□□□□ -0.52
RD3-201ENST00000367002 PEX5P50542 639 aa11.77□□□□□ -0.52
RD3-201ENST00000367002 FKBP1AP62942 108 aaKnown RBP11.77□□□□□ -0.52
RD3-201ENST00000367002 DMC1Q14565 340 aa11.77□□□□□ -0.52
RD3-201ENST00000367002 KYAT3Q6YP21 454 aaKnown RBP11.77□□□□□ -0.52
RD3-201ENST00000367002 ZNF333Q96JL9 665 aa11.77□□□□□ -0.52
RD3-201ENST00000367002 PRPF18Q99633 342 aaKnown RBP11.77□□□□□ -0.52
RD3-201ENST00000367002 ATXN3LQ9H3M9 355 aa11.77□□□□□ -0.52
RD3-201ENST00000367002 ACSS3Q9H6R3 686 aa11.77□□□□□ -0.52
RD3-201ENST00000367002 TRMT6Q9UJA5 497 aaKnown RBP11.77□□□□□ -0.52
RD3-201ENST00000367002 R3HDM2Q9Y2K5 976 aaKnown RBP11.77□□□□□ -0.52
RD3-201ENST00000367002 ALOX15BO15296 676 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 CRADDP78560 199 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 OASLQ15646 514 aaKnown RBP11.77□□□□□ -0.53
RD3-201ENST00000367002 UGCGQ16739 394 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 PTAR1Q7Z6K3 402 aaPredicted RBP11.77□□□□□ -0.53
RD3-201ENST00000367002 DEFB132Q7Z7B7 95 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 KCNMB4Q86W47 210 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 ZDHHC17Q8IUH5 632 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 USP6NLQ92738 828 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 SH3KBP1Q96B97 665 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 ZNF184Q99676 751 aaPredicted RBP11.77□□□□□ -0.53
RD3-201ENST00000367002 TMEM134Q9H6X4 195 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 TRPC7Q9HCX4 862 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 RNF19AQ9NV58 838 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 FZD1Q9UP38 647 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 FARP1Q9Y4F1 1045 aaPredicted RBP11.77□□□□□ -0.53
RD3-201ENST00000367002 hCG_1818297A0A087WSY0 165 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 SYNDIG1LA6NDD5 238 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 ITGAVP06756 1048 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 HARS2P49590 506 aaKnown RBP11.77□□□□□ -0.53
RD3-201ENST00000367002 CSE1LP55060 971 aaKnown RBP11.77□□□□□ -0.53
RD3-201ENST00000367002 CCDC153Q494R4 210 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 TATDN1Q6P1N9 297 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 MICU2Q8IYU8 434 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 BHMTQ93088 406 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 FAM162AQ96A26 154 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 SPATA17Q96L03 361 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 CDRT15Q96T59 188 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 APBA2Q99767 749 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 C17orf80Q9BSJ5 609 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 COG4Q9H9E3 785 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 GPBP1L1Q9HC44 474 aaPredicted RBP11.77□□□□□ -0.53
RD3-201ENST00000367002 ETNK2Q9NVF9 386 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 DDX43Q9NXZ2 648 aaKnown RBP11.77□□□□□ -0.53
RD3-201ENST00000367002 COG5Q9UP83 839 aa11.77□□□□□ -0.53
RD3-201ENST00000367002 A0A1W2PPM1 405 aa11.76□□□□□ -0.53
RD3-201ENST00000367002 NCF1BA6NI72 391 aaPredicted RBP11.76□□□□□ -0.53
RD3-201ENST00000367002 NCF1CA8MVU1 366 aaPredicted RBP11.76□□□□□ -0.53
RD3-201ENST00000367002 EVPLLA8MZ36 301 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms