RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 RBAK-RBAKDNI3L0D1 243 aa12.36□□□□□ -0.43
CDC42BPA-203ENST00000366766 TBC1D12O60347 775 aa12.36□□□□□ -0.43
CDC42BPA-203ENST00000366766 CD151P48509 253 aa12.36□□□□□ -0.43
CDC42BPA-203ENST00000366766 UBA3Q8TBC4 463 aa12.36□□□□□ -0.43
CDC42BPA-203ENST00000366766 ADARB2Q9NS39 739 aaKnown RBP12.36□□□□□ -0.43
CDC42BPA-203ENST00000366766 BIRC5O15392 142 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 ZNF184Q99676 751 aaPredicted RBP12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 DPP7Q9UHL4 492 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 DAB2P98082 770 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 DEPDC1Q5TB30 811 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 HERC6Q8IVU3 1022 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 MYO1HQ8N1T3 1032 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 GPRC5CQ9NQ84 441 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 FBXO28Q9NVF7 368 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 RABGEF1Q9UJ41 708 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 AP5Z1O43299 807 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 ACOT1Q86TX2 421 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 RAP1GDS1P52306 607 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 MRPS15P82914 257 aaKnown RBP12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 CNTN1Q12860 1018 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 ETNPPLQ8TBG4 499 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 TUBGCP3Q96CW5 907 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 COL14A1Q05707 1796 aaKnown RBP12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 UBDO15205 165 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 RPL21P46778 160 aaKnown RBP12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 SLC34A1Q06495 639 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 SLC15A2Q16348 729 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 SLC27A1Q6PCB7 646 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 EPS8L1Q8TE68 723 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 A0A087X1B8 175 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 VCLP18206 1134 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 CHRM3P20309 590 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 PLOD1Q02809 727 aaPredicted RBP12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 ACER1Q8TDN7 264 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 SLC25A23Q9BV35 468 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 ABLIM1O14639 778 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 KLHL41O60662 606 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 ATP6V1G2O95670 118 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 TRIM60Q495X7 471 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 EPC2Q52LR7 807 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 ZRANB3Q5FWF4 1079 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 DDHD1Q8NEL9 900 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 OPTNQ96CV9 577 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 AFF4Q9UHB7 1163 aaKnown RBP12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 GGT7Q9UJ14 662 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 RASSF9O75901 435 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 ZNF280DQ6N043 979 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 LRRC71Q8N4P6 559 aa12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 SEPT5Q99719 369 aaPredicted RBP12.35□□□□□ -0.43
CDC42BPA-203ENST00000366766 AIF1P55008 147 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 ITGB3BPQ13352 177 aaPredicted RBP12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 FRG1Q14331 258 aaKnown RBP12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 UCMAQ8WVF2 138 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 FBXO32Q969P5 355 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 HES6Q96HZ4 224 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 CNBD2Q96M20 576 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 SUPT7LO94864 414 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 KRT6AP02538 564 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 KRT6BP04259 564 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 PTPN7P35236 360 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 KRT6CP48668 564 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 PLEKHH3Q7Z736 793 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 YAF2Q8IY57 180 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 SETD9Q8NE22 299 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 TRAPPC9Q96Q05 1148 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 SLC24A3Q9HC58 644 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 H3BMM5 538 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 ZBTB7AO95365 584 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 DMAP1Q9NPF5 467 aaPredicted RBP12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 COMMD8Q9NX08 183 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 C15orf41Q9Y2V0 281 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 LYPLA2O95372 231 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 TSPAN16Q9UKR8 245 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 RRM2P31350 389 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 RNF43Q68DV7 783 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 TMEM245Q9H330 911 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 H2AFY2Q9P0M6 372 aaPredicted RBP12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 SPACA6W5XKT8 324 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 MAP1BP46821 2468 aaKnown RBP12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 H3BRB1 525 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 TBL3Q12788 808 aaKnown RBP12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 TUT1Q9H6E5 874 aaKnown RBP12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 TFR2Q9UP52 801 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 SLC1A6P48664 564 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 PRIM2P49643 509 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 SLC6A3Q01959 620 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 ATP6AP1LQ52LC2 224 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 REPS2Q8NFH8 660 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 SCUBE2Q9NQ36 999 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 TLR8Q9NR97 1041 aaKnown RBP12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 COPG2Q9UBF2 871 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 TNPO3Q9Y5L0 923 aaKnown RBP12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 LAMB4A4D0S4 1761 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 HLA-DPA1P20036 260 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 LRRC36Q1X8D7 754 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 RDH11Q8TC12 318 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 PRMT6Q96LA8 375 aaPredicted RBP12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 ZNF670Q9BS34 389 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 KCTD10Q9H3F6 313 aa12.34□□□□□ -0.43
CDC42BPA-203ENST00000366766 ENTPD7Q9NQZ7 604 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms