RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 SF3B1O75533 1304 aaKnown RBP eCLIP13.93□□□□□ -0.18
UBA3-201ENST00000349511 FOXO6A8MYZ6 492 aa13.92□□□□□ -0.18
UBA3-201ENST00000349511 KIAA0355O15063 1070 aa13.92□□□□□ -0.18
UBA3-201ENST00000349511 PRPSAP2O60256 369 aa13.92□□□□□ -0.18
UBA3-201ENST00000349511 MGRN1O60291 552 aa13.92□□□□□ -0.18
UBA3-201ENST00000349511 TTC4O95801 387 aa13.92□□□□□ -0.18
UBA3-201ENST00000349511 ATF2P15336 505 aa13.92□□□□□ -0.18
UBA3-201ENST00000349511 RPL17P18621 184 aaKnown RBP13.92□□□□□ -0.18
UBA3-201ENST00000349511 PAX3P23760 479 aa13.92□□□□□ -0.18
UBA3-201ENST00000349511 WDR5P61964 334 aaKnown RBP13.92□□□□□ -0.18
UBA3-201ENST00000349511 YWHAZP63104 245 aaKnown RBP13.92□□□□□ -0.18
UBA3-201ENST00000349511 MMRN1Q13201 1228 aa13.92□□□□□ -0.18
UBA3-201ENST00000349511 KYNUQ16719 465 aa13.92□□□□□ -0.18
UBA3-201ENST00000349511 PREPLQ4J6C6 727 aaPredicted RBP13.92□□□□□ -0.18
UBA3-201ENST00000349511 FAM133BQ5BKY9 247 aaKnown RBP13.92□□□□□ -0.18
UBA3-201ENST00000349511 EFHC1Q5JVL4 640 aa13.92□□□□□ -0.18
UBA3-201ENST00000349511 LRRC38Q5VT99 294 aa13.92□□□□□ -0.18
UBA3-201ENST00000349511 SPOCD1Q6ZMY3 1216 aa13.92□□□□□ -0.18
UBA3-201ENST00000349511 CYP4V2Q6ZWL3 525 aaPredicted RBP13.92□□□□□ -0.18
UBA3-201ENST00000349511 RCOR2Q8IZ40 523 aa13.92□□□□□ -0.18
UBA3-201ENST00000349511 TMEM199Q8N511 208 aa13.92□□□□□ -0.18
UBA3-201ENST00000349511 SPATA18Q8TC71 538 aa13.92□□□□□ -0.18
UBA3-201ENST00000349511 GRK7Q8WTQ7 553 aa13.92□□□□□ -0.18
UBA3-201ENST00000349511 EDEM1Q92611 657 aa13.92□□□□□ -0.18
UBA3-201ENST00000349511 RBM41Q96IZ5 413 aaKnown RBP13.92□□□□□ -0.18
UBA3-201ENST00000349511 PWWP2AQ96N64 755 aa13.92□□□□□ -0.18
UBA3-201ENST00000349511 CALN1Q9BXU9 219 aa13.92□□□□□ -0.18
UBA3-201ENST00000349511 ZCWPW1Q9H0M4 648 aa13.92□□□□□ -0.18
UBA3-201ENST00000349511 CSNK1G1Q9HCP0 422 aa13.92□□□□□ -0.18
UBA3-201ENST00000349511 DMAP1Q9NPF5 467 aaPredicted RBP13.92□□□□□ -0.18
UBA3-201ENST00000349511 CYLDQ9NQC7 956 aa13.92□□□□□ -0.18
UBA3-201ENST00000349511 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.92□□□□□ -0.18
UBA3-201ENST00000349511 ABCF3Q9NUQ8 709 aa13.92□□□□□ -0.18
UBA3-201ENST00000349511 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.92□□□□□ -0.18
UBA3-201ENST00000349511 SAE1Q9UBE0 346 aaPredicted RBP13.92□□□□□ -0.18
UBA3-201ENST00000349511 SLC27A5Q9Y2P5 690 aa13.92□□□□□ -0.18
UBA3-201ENST00000349511 PTPRDP23468 1912 aa13.92□□□□□ -0.18
UBA3-201ENST00000349511 ABHD14A-ACY1A0A1B0GW23 586 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 TCP11X1B4DZS4 312 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 CAPN9O14815 690 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 SYN3O14994 580 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 ZBED1O96006 694 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 OAS1P00973 400 aaKnown RBP13.91□□□□□ -0.18
UBA3-201ENST00000349511 KRT7P08729 469 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 CPB1P15086 417 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 KDELR1P24390 212 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 ATP5DP30049 168 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 RFC2P35250 354 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 SULT1E1P49888 294 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 DAOAP59103 153 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 NME3Q13232 169 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 MAPRE1Q15691 268 aaKnown RBP13.91□□□□□ -0.18
UBA3-201ENST00000349511 HIBCHQ6NVY1 386 aaPredicted RBP13.91□□□□□ -0.18
UBA3-201ENST00000349511 FAM131BQ86XD5 332 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 CCDC63Q8NA47 563 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 ATL2Q8NHH9 583 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 KCNK9Q9NPC2 374 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 TMPRSS4Q9NRS4 437 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 NINJ2Q9NZG7 142 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 ANAPC5Q9UJX4 755 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 C3orf70A6NLC5 250 aaPredicted RBP13.91□□□□□ -0.18
UBA3-201ENST00000349511 GAS8O95995 478 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 AMHP03971 560 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 FYNP06241 537 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 NCAM1P13591 858 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 SYN1P17600 705 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 FGFR3P22607 806 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 ADCY8P40145 1251 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 MATKP42679 507 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 CDKN2BP42772 138 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 VPS41P49754 854 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 CDH6P55285 790 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 CAV1Q03135 178 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 KLF1Q13351 362 aaPredicted RBP13.91□□□□□ -0.18
UBA3-201ENST00000349511 BTG3Q14201 252 aaPredicted RBP13.91□□□□□ -0.18
UBA3-201ENST00000349511 ACAP1Q15027 740 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 CA9Q16790 459 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 RAB41Q5JT25 222 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 WLSQ5T9L3 541 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 C4orf50Q6ZRC1 276 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 C16orf59Q7L2K0 433 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 ANKRD42Q8N9B4 389 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 MAGEC3Q8TD91 643 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 BADQ92934 168 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 TMEM175Q9BSA9 504 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 MLXIPLQ9NP71 852 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 DDX56Q9NY93 547 aaKnown RBP13.91□□□□□ -0.18
UBA3-201ENST00000349511 CHD7Q9P2D1 2997 aa13.91□□□□□ -0.18
UBA3-201ENST00000349511 PCK1P35558 622 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 PGFP49763 221 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 SLC5A3P53794 718 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 MRPL58Q14197 206 aaKnown RBP13.9□□□□□ -0.18
UBA3-201ENST00000349511 TFDP3Q5H9I0 405 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 FAM182AQ5T1J6 154 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 ZNF280DQ6N043 979 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 KCNT2Q6UVM3 1135 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 POLNQ7Z5Q5 900 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 DCP1BQ8IZD4 617 aaKnown RBP13.9□□□□□ -0.18
UBA3-201ENST00000349511 TTPALQ9BTX7 342 aa13.9□□□□□ -0.18
UBA3-201ENST00000349511 VN1R3Q9BXE9 311 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms