RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 CXorf49A8MYA2 514 aaPredicted RBP13.03□□□□□ -0.32
LIMK1-201ENST00000336180 GPR182O15218 404 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 WARSP23381 471 aaKnown RBP13.03□□□□□ -0.32
LIMK1-201ENST00000336180 STX2P32856 288 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 ABCG1P45844 678 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 ACLYP53396 1101 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 INHBEP58166 350 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 PPP2R5DQ14738 602 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 UPP1Q16831 310 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 KBTBD12Q3ZCT8 623 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 SERPINB12Q96P63 405 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 CCDC77Q9BR77 488 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 TRABDQ9H4I3 376 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 GRID1Q9ULK0 1009 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.03□□□□□ -0.32
LIMK1-201ENST00000336180 KLHL33A6NCF5 533 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 ENDOD1O94919 500 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 SETSIPP0DME0 302 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 KRT4P19013 534 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 HOXC8P31273 242 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 TM4SF4P48230 202 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 IRX4P78413 519 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 MGAT3Q09327 533 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 DNAJC3Q13217 504 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 C1QTNF12Q5T7M4 302 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 TRMT10BQ6PF06 316 aaKnown RBP13.03□□□□□ -0.32
LIMK1-201ENST00000336180 TAOK1Q7L7X3 1001 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 PDCD7Q8N8D1 485 aaKnown RBP13.03□□□□□ -0.32
LIMK1-201ENST00000336180 PAFAH2Q99487 392 aa13.03□□□□□ -0.32
LIMK1-201ENST00000336180 ZNF638Q14966 1978 aaKnown RBP13.02□□□□□ -0.32
LIMK1-201ENST00000336180 NUP205Q92621 2012 aa13.02□□□□□ -0.32
LIMK1-201ENST00000336180 MDM4O15151 490 aa13.02□□□□□ -0.32
LIMK1-201ENST00000336180 ALOX15BO15296 676 aa13.02□□□□□ -0.32
LIMK1-201ENST00000336180 CDH16O75309 829 aa13.02□□□□□ -0.32
LIMK1-201ENST00000336180 CA4P22748 312 aa13.02□□□□□ -0.32
LIMK1-201ENST00000336180 FOXN2P32314 431 aa13.02□□□□□ -0.32
LIMK1-201ENST00000336180 PTPN7P35236 360 aa13.02□□□□□ -0.32
LIMK1-201ENST00000336180 ARL4AP40617 200 aa13.02□□□□□ -0.32
LIMK1-201ENST00000336180 RNASELQ05823 741 aaKnown RBP13.02□□□□□ -0.32
LIMK1-201ENST00000336180 SLC1A5Q15758 541 aa13.02□□□□□ -0.32
LIMK1-201ENST00000336180 DDR2Q16832 855 aa13.02□□□□□ -0.32
LIMK1-201ENST00000336180 TOP6BLQ8N6T0 577 aa13.02□□□□□ -0.32
LIMK1-201ENST00000336180 RNF139Q8WU17 664 aa13.02□□□□□ -0.32
LIMK1-201ENST00000336180 ARHGEF4Q9NR80 690 aa13.02□□□□□ -0.32
LIMK1-201ENST00000336180 IRAK4Q9NWZ3 460 aa13.02□□□□□ -0.32
LIMK1-201ENST00000336180 RABGEF1Q9UJ41 708 aa13.02□□□□□ -0.32
LIMK1-201ENST00000336180 IGHA2P01877 340 aa13.02□□□□□ -0.33
LIMK1-201ENST00000336180 LRPAP1P30533 357 aa13.02□□□□□ -0.33
LIMK1-201ENST00000336180 GRK4P32298 578 aa13.02□□□□□ -0.33
LIMK1-201ENST00000336180 GSCP56915 257 aaPredicted RBP13.02□□□□□ -0.33
LIMK1-201ENST00000336180 WDR4P57081 412 aaKnown RBP13.02□□□□□ -0.33
LIMK1-201ENST00000336180 MTA1Q13330 715 aa13.02□□□□□ -0.33
LIMK1-201ENST00000336180 FAM133BQ5BKY9 247 aaKnown RBP13.02□□□□□ -0.33
LIMK1-201ENST00000336180 RWDD4Q6NW29 188 aaKnown RBP13.02□□□□□ -0.33
LIMK1-201ENST00000336180 ATXN7L3BQ96GX2 97 aa13.02□□□□□ -0.33
LIMK1-201ENST00000336180 SHOC2Q9UQ13 582 aa13.02□□□□□ -0.33
LIMK1-201ENST00000336180 Q9Y3F1 56 aa13.02□□□□□ -0.33
LIMK1-201ENST00000336180 BPTFQ12830 3046 aa13.02□□□□□ -0.33
LIMK1-201ENST00000336180 GABRDO14764 452 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 PGGT1BP53609 377 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 SLC25A52Q3SY17 297 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 TMCO2Q7Z6W1 182 aaPredicted RBP13.01□□□□□ -0.33
LIMK1-201ENST00000336180 TTC39CQ8N584 583 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 PRDM12Q9H4Q4 367 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 TCRBV9S1A1TA0A576 114 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 DPYSL4O14531 572 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 GRIK1P39086 918 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 FAAP100Q0VG06 881 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 STAT4Q14765 748 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 SLC39A12Q504Y0 691 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 EFHC1Q5JVL4 640 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 FBXW10Q5XX13 1052 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 HEATR6Q6AI08 1181 aaKnown RBP13.01□□□□□ -0.33
LIMK1-201ENST00000336180 ARHGEF18Q6ZSZ5 1173 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 HACE1Q8IYU2 909 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 MAML1Q92585 1016 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 ZNF317Q96PQ6 595 aaPredicted RBP13.01□□□□□ -0.33
LIMK1-201ENST00000336180 TGS1Q96RS0 853 aaKnown RBP13.01□□□□□ -0.33
LIMK1-201ENST00000336180 SLC17A7Q9P2U7 560 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 FZD10Q9ULW2 581 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 UNC80Q8N2C7 3258 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 KIAA0754O94854 1291 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 UPP2O95045 317 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 CKBP12277 381 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 DESP17661 470 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 DAOAP59103 153 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 PDK2Q15119 407 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 OVOS1Q6IE37 1185 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 CD300LGQ6UXG3 332 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 CACNA2D3Q8IZS8 1091 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 NPWQ8N729 165 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 ROPN1BQ9BZX4 212 aaPredicted RBP13.01□□□□□ -0.33
LIMK1-201ENST00000336180 ROPN1Q9HAT0 212 aaPredicted RBP13.01□□□□□ -0.33
LIMK1-201ENST00000336180 SLC27A5Q9Y2P5 690 aa13.01□□□□□ -0.33
LIMK1-201ENST00000336180 GOLGA6L7A0A1B0GV03 622 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 EEF2KO00418 725 aaKnown RBP13□□□□□ -0.33
LIMK1-201ENST00000336180 KIF3CO14782 793 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 SCAMP3O14828 347 aaKnown RBP13□□□□□ -0.33
LIMK1-201ENST00000336180 HMBSP08397 361 aa13□□□□□ -0.33
LIMK1-201ENST00000336180 PSMB4P28070 264 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms